Rhizobium sp. Kim5: Kim5_PD00061
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Entry
Kim5_PD00061 CDS
T05501
Symbol
mccA
Name
(GenBank) methylcrotonoyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00280
Valine, leucine and isoleucine degradation
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Kim5_PD00061 (mccA)
Enzymes [BR:
rhk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Kim5_PD00061 (mccA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
HlyD_3
Biotin_lipoyl_2
HlyD_D23
BT_MCC_alpha
DUF2118
ATPgrasp_ST
ATP-grasp_5
ATP-grasp_4
GCV_H
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
ARQ62069
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All DBs
Position
pRetKim5d:complement(58922..60784)
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AA seq
620 aa
AA seq
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MESLLIANRGEIARRIIRTAKILGIRTIAVYSEADAGLPFVREADEAIAIGPPPARESYL
SEARILEAARKTGAAAIHPGYGFLSENADFAEAVENAGIIWVGAPPAAIRAMGLKDAAKQ
LMQAAGVPVTPGYLGPDQSEKRLAAEADAIGYPVLIKAVAGGGGKGMRRVDRPQDFAEGL
ASCRREAAASFGDDRVLIERYIANPRHIEVQVFADTHGNCVHLFERDCSLQRRHQKVIEE
APAPGLDAATRAAICDAAVKAARAVNYVGAGTIEFIADASSGLNADRIWFMEMNTRLQVE
HPVTEAITGEDLVLWQLKVASGEPLPKSQDEITMNGWAFEARLYAENPAAGYLPSTGRLD
HLKLPQAVRVDSGVERGDEITAFYDPMIAKIIAHGPNRGAALSKLAAACAVIEVWPVRSN
AGLLARIANDPDFRAANIDTGFLDRHGESLVANDPDETVIDKAATALSKGMVGDPWSALT
GFRIAGPDDSRVRVRIDGHLHWGRARGDLETNAIEIDEATVLFDAGNAWSIGLPHAGEVE
ANHGVGDGAILSPMPGLVISVDVTEGDAVAKGDRLLTVEAMKMEHTLRAPFDGVVGKLQV
SPGTRVSENQLVVTVMKGEE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtcttctcattgccaaccggggcgagatcgcccgccgcatcatccgcacggcg
aaaatactcggcatccgcaccattgcggtctattccgaggccgatgccggcctgcccttt
gtgagagaagcggacgaggcaatcgccatcggcccgccgcccgcccgcgaaagctatctc
tccgaggcacgcatcctggaagccgcccggaaaaccggcgctgcggccatccatcccggt
tacggtttcctgtcggaaaatgctgactttgccgaagcggtcgaaaatgccggcataatc
tgggtcggcgcgccgccggccgccatccgcgccatggggctgaaggacgccgccaaacaa
ttgatgcaggcggcaggcgtcccggtgactcccggctatctcggaccggaccagagcgaa
aagcggctggccgccgaggcggatgccatcggttatcccgtgctgatcaaggccgtcgct
ggcggcggcggcaagggcatgcggcgcgtcgaccggccgcaggattttgccgaaggtctc
gcctcctgccgccgcgaggcagccgcctctttcggcgacgaccgtgttctgatcgagcgc
tatatcgccaatccgcgccatatcgaggtgcaggtctttgccgacacgcacggaaactgc
gttcatctcttcgaacgcgattgttcgctgcagcgccggcaccagaaagtcatcgaagag
gcccctgcccccggccttgatgccgccacccgcgcggcgatctgcgatgcggcggtcaag
gccgcaagagcggtgaattatgtcggcgccggcacgatcgaattcatcgccgacgcctcc
tcgggcctcaatgccgaccgcatctggttcatggagatgaacacgcgcctgcaagtcgag
catccggttaccgaggccataacaggcgaagatctggtgctttggcagctgaaggtcgcg
agcggcgagccgctgccgaaaagccaggacgagatcaccatgaacggctgggccttcgaa
gcccggctctatgccgaaaaccccgccgccggctacctgccctcgaccggccggctcgac
catctcaaactgccgcaggcggttcgtgtcgacagcggcgtcgagcggggagacgagatc
accgccttctacgacccgatgatcgccaagatcattgcgcatggaccgaaccgcggggcc
gccctgtctaagctcgccgccgcctgtgccgtcatcgaggtctggccggtccgatccaat
gctggtcttctcgcccgcatcgccaatgatccggattttcgcgccgcaaacatcgatacc
ggctttctcgaccgccatggcgaaagccttgtcgccaacgatcctgatgaaaccgtcatc
gacaaagcagccacggcactttcgaagggcatggttggcgatccctggtctgcgctgacc
ggcttccgcatcgccgggccagacgacagccgcgtgcgggtgcgcatcgacggtcatctc
cattggggacgcgcacgcggcgacctcgaaacaaatgccatcgagatagacgaggcgaca
gtgctattcgatgcgggcaatgcctggtcgatcggcctgccccatgcgggtgaggtcgag
gcgaaccacggcgtgggcgacggcgccatcctgtcacccatgccgggcctcgtcatttcg
gttgacgtcactgagggcgacgcggtcgccaaaggggaccgtctgctgaccgtcgaagcg
atgaagatggaacatacgctgcgggcgccattcgacggcgtcgtcggaaaattgcaggtc
tcccccggaaccagagtctcggaaaaccagctggtcgtcaccgtcatgaagggagaggag
tga
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