Rhizobium sp. Kim5: Kim5_PD00100
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Entry
Kim5_PD00100 CDS
T05501
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02010
ABC transporters
rhk02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Kim5_PD00100
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Kim5_PD00100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PD00100
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Kim5_PD00100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Peripla_BP_1
DUF725
Motif
Other DBs
NCBI-ProteinID:
ARQ62108
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All DBs
Position
pRetKim5d:complement(108549..109610)
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AA seq
353 aa
AA seq
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MPIGNSTYPARGRRIAGLLVAAVLALGGQTAGAAEIHLDAPAPTPPAEVAKFEPIQPGSA
KGLTLGFTQLILGVPFTDALQRGMEKASETAGFKLVTCDSKMDAATALSCVRQFKTQNVD
GLITFQADAAAAANICAEGPKVPVIAIDIEQKPCETAFVGAANSYAGEIVGHELGMYFAK
NFNCEYDAFVSLESTAVGVVNDQRMGGIRKAFEVVCGPVQNLRIIDTGAGGQADAAQRQF
TDTLTALPGATKIITVGINEDVITAALAAARTQGRNQDLYLGVQNFDPDNCQIWTAPHFI
ATAAYFPERYADLIVPNLVKAIKGEKINSQILVPHELITPANIAKVYPEYACK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcctataggaaattcgacatatcccgcccgcggacgccgcatcgctggcctgctcgtt
gcggccgttctggcgctgggaggccagacggccggtgctgccgagatccatctggacgcc
ccggcgccgacaccgcctgcggaagtggcaaagttcgagccgatccaacccggcagcgcc
aagggactgacacttggctttacccagctcatcctcggcgttcccttcacggatgcactg
cagcgcggcatggagaaggcctccgaaactgccggcttcaagctggtgacctgcgattcc
aagatggatgccgccaccgccctctcctgcgtccgccagttcaagacgcagaacgtcgat
ggtctcatcacattccaggcagacgctgcggccgccgccaacatctgcgccgaaggcccc
aaagttcccgtcatcgcgatcgatatcgaacagaagccgtgcgaaaccgcctttgtcggc
gcggccaattcctatgccggtgaaatcgtcggccatgaactcggcatgtatttcgccaag
aatttcaattgcgaatacgatgccttcgtatcgctggaatcgacggccgtgggcgtcgtc
aacgaccagcggatgggcggcatccgcaaggccttcgaggtcgtttgcgggccggtgcag
aacctgcgcatcatcgatacgggcgccggcggccaggccgatgcagcgcaacgccagttc
accgatacgctgaccgccctgcccggcgccaccaagatcatcaccgtgggcatcaacgaa
gacgtcatcaccgcagcgctggccgctgcgcgcacgcagggacggaaccaggatctctat
ctgggcgtccagaatttcgaccccgacaattgccagatctggaccgcgccgcatttcatc
gcgacggccgcctatttcccggagcgttacgccgatctgatcgttcccaacctggtcaag
gccatcaagggcgagaagatcaacagccagatcctggttccgcatgagctgattaccccg
gcaaatatcgccaaggtctatccggagtatgcctgcaaatga
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