KEGG   Rhizobium sp. Kim5: Kim5_PD00213
Entry
Kim5_PD00213      CDS       T05501                                 
Symbol
virB4-2
Name
(GenBank) type IV secretion system protein VirB4 2
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PD00213 (virB4-2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PD00213 (virB4-2)
Enzymes [BR:rhk01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Kim5_PD00213 (virB4-2)
Secretion system [BR:rhk02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Kim5_PD00213 (virB4-2)
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 FtsK_SpoIIIE ATPase_2 AAA_16 ABC_tran T2SSE NPHP3_N TrwB_AAD_bind AAA_23 cobW RsgA_GTPase AAA_24
Other DBs
NCBI-ProteinID: ARQ62219
LinkDB
Position
pRetKim5d:216515..218881
AA seq 788 aa
MSNIAKLRSRELGPETFIPYIRHIDDSIIALDSGAMMAMIALDGISFETADVLDINSLHR
SLNTLYRNIADERLSLWTHVIRRRDNAYPDGQFANAFSNRLNAKYRERMVREDLFRNDLY
VTLVWHPDRDAAQRAASLLNRLRRARRTGAEVDGIALKHLRDKVVDLAAGLRRFEPRILT
LYEQDGIVFSEPSEVLHQIVGGRGEPIPLTEGRISSAIYSDRVIFGRETIEIRHEAESRF
AGMFGFKEYPAATRPGMLDGILTAPFELILTQSFTFTAKADARVIMGRKQNQMVSAGDKA
ASQVDELSEAIDDLESNRFVLGEHHLGLSAFASSVNELTDNLAKARAYLTNGGAVVARED
LGLEAAWWAQLPGNRRYRARSGAVTSRNFAALAPYHSYPTGQKDGNEWGPAVAMLKTASG
SPYYFNFHYGDLGNTFICGPSGAGKTVLLNFMLSQLEKHDPHMVFFDKDRGADLFVRAAG
GNYLPLKNGIATGCAPLKTLEFTAEIKIFLTGWIAKLVGSTRGELSTTELRDIASAVDGV
ADLPVERRSIGALRTFLNNTDPEGIALRLRRWERGGPLGWVFDNESDDIGIDAKFIGYDM
TDFLDNEEIRTPLMAYLFYRIEQLIDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQ
NGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLANPRGDRADYIDGFKLTEREFELISRE
IPVESRRFIVKQGHNSVVAELNLNGFDDELAILSGRTANVELADVIRAEVGDRRQDWLPV
FQQRRRAR
NT seq 2367 nt   +upstreamnt  +downstreamnt
ttgtctaatatcgcgaagctgcgttcccgcgaactcgggcccgagactttcatcccctat
atcaggcacattgacgattcgatcatcgctctcgattccggcgcgatgatggcgatgatc
gcgctcgatggcatttccttcgagactgcagacgttctggacatcaacagcctgcatcgc
agtttgaacacgctctaccgcaacatcgcggacgagcggctgtcgctgtggacgcatgtc
atccgccggcgcgacaatgcctatcccgatggtcaattcgccaatgccttttccaatcgg
ctgaacgccaaataccgcgagcggatggttcgagaagatctgtttcgcaatgatctttat
gtcaccctcgtatggcatcccgatcgcgatgccgcccagagagccgcgagccttctcaac
cggctgcgaagagcgcgtcgcacgggagcggaggtggacgggattgcgttgaagcacctg
cgcgacaaggtcgtggacctggcggcagggctgaggcgcttcgagcctcgtatcctgacc
ctttacgaacaggacggcattgtgttttcggagccgagcgaggtgcttcatcagatcgtc
ggcggccggggcgagccgatcccgttgacggaagggcgtatatcgtcggcgatctattcc
gaccgcgtgatcttcgggcgcgaaactatcgagatccgtcatgaagccgaaagccgcttt
gctggaatgttcggtttcaaggaatatccggcggcgacgcgcccgggcatgctcgatggc
atcctgactgcgccgttcgagctcatcctgacgcagtcctttaccttcaccgccaaggcc
gacgcgcgtgtgatcatgggccgcaagcagaaccagatggtgagcgccggcgacaaggcc
gcctcgcaggtcgacgagctcagtgaggccatcgacgatctggaatcgaaccgatttgtc
ctcggcgaacatcatctcgggctatccgcttttgcctcctcggttaacgagctcaccgac
aatctggcgaaggcgcgcgcctatctcaccaatggcggcgccgtcgtcgcccgcgaggat
ctcggtctcgaagccgcctggtgggcacaactccccggaaatcgtcggtatcgcgcgcgt
tcgggcgctgtcacctcgcgcaactttgctgctctggcgccctaccattcctatcccaca
ggtcagaaggatggcaacgaatgggggccggccgtcgccatgctgaagaccgcgtcaggc
tcgccgtattatttcaatttccactatggcgatctcggcaacaccttcatttgcggcccg
tcgggtgcgggcaagacggtgctgttgaacttcatgctctcgcagctcgaaaagcatgat
cctcatatggtcttcttcgataaggatcgcggcgctgatctcttcgtgcgtgcggccggc
ggcaactatctgccgctgaagaatggtattgccaccggctgcgcgccgttgaaaacactg
gaattcactgcggaaatcaagatattcctcaccggctggatcgctaagctggtcggatct
acccgcggcgaactatcgactaccgagttgcgtgacatcgcctcggcggtcgacggggtg
gcggacctgccggtggagcgtcgctccatcggcgccctgcgcacctttctcaacaatacc
gatcccgagggcatcgccttgaggttgaggcgttgggagaggggagggccgctcggctgg
gtcttcgacaatgagagcgacgacattggcatcgacgccaagtttatcggctacgacatg
accgatttcctcgataacgaggagatccgcacgccgttgatggcttacctgttctaccgc
atcgagcagctgatcgacggacggcgcatcattatcgtcatcgacgaattctggaaggcg
ctgcaggacgaaggctttcgcgatctcgcccagaataagctcaagacgatccgcaagcag
aatggtctgatgctgtttgccacgcagagcccacgtgacgccatcgtctcgccgatcgcg
catacgattatcgagcagtgccccacgcagatcttcttagccaacccgcgcggcgaccgc
gccgattatatcgacgggttcaagctgaccgagcgcgaattcgagctcatctcacgagag
atcccggtcgagagccgccgcttcatcgtcaagcagggtcacaacagcgttgtcgccgaa
ttgaacctcaacggcttcgacgacgaactcgccatcctctccggccggacagccaacgtg
gagcttgccgatgtcattcgggcggaggtcggcgaccggcgtcaggattggcttccggtg
tttcagcaaagaaggagagcacgctga

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