Rhizobium sp. Kim5: Kim5_PD00289
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Entry
Kim5_PD00289 CDS
T05501
Name
(GenBank) O-antigen ligase-related protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00540
Lipopolysaccharide biosynthesis
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Kim5_PD00289
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhk01005
]
Kim5_PD00289
Enzymes [BR:
rhk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
Kim5_PD00289
Lipopolysaccharide biosynthesis proteins [BR:
rhk01005
]
Core region
Kim5_PD00289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ARQ62294
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All DBs
Position
pRetKim5d:complement(295387..296661)
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AA seq
424 aa
AA seq
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MNYFRQLVIAILHPGDGSGSTLDRTNGIAVFLFAILPGLSPNFNGFILLASMLSGIYLLV
TARFPLNFSKSDRAVAICMTIYPLVMIASIFINPPYSEVADWIFRLLPFFSIWLILPRMR
QSPDGRLVPLFILGAGIGMIVTFIMSLLQIMFLMERAEAGTSNAALLGIIGLLFGGVALL
NVQSPKSVEQRIAILGYAAGLGCVLLSGTRSAWLAIPVHLVIFLWYFRKHSFHLSLRSLA
ITGSLLFAGLIALGSGQIIHRIEALQENMAALERSEGEITSLSARVALYKGALSAISKDP
LTGYGPQNRMASVLAELPDSMRPYLTFSHVHNGFLTAGIDAGVVGIAALSLLLLTPVIAA
WKKEPGPGRDLSIALALLLTSSYVVTGSVGIMFNQKALDPIFAYMVALICLDRGSTGFAP
VVRS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatttcaggcaactcgtgattgcgatacttcatcccggggacgggtctggaagc
acgcttgatcgaaccaacggcattgcggtttttctctttgcaatcctgcccggactttca
cccaatttcaacgggttcatcctcctcgcgtcgatgctgtcgggcatctacttgctggtg
acggcccgctttcctctgaacttttcgaaatcagaccgggcagtcgccatctgcatgacg
atctacccgctggtgatgatcgccagcatcttcatcaacccgccttactccgaagtggcg
gactggatattccggctcctgccctttttttcgatttggctgatattgccgcgaatgcgc
caatcgcccgatggccgcctcgtgccactgtttatcctcggcgccgggatcggcatgatc
gttacctttatcatgagcctgctgcagattatgtttctgatggagagagcagaggctggg
acatcgaatgcagcgctcctcggaatcataggccttcttttcgggggcgttgcgcttctc
aacgttcaatctcccaaaagcgtggagcaaagaattgcgatcttgggatatgccgccggc
ctcggctgcgtgctgctttccggaacgcgttccgcctggctggccattcccgtccatctc
gtcatctttctctggtattttcgcaaacacagcttccatctgagtttgcgcagtctcgcc
atcaccggctctttgttgtttgcgggacttatcgcgctgggcagcggccagatcatccat
cgcatcgaggcgctgcaggaaaatatggcagcgcttgaacgcagtgaaggcgagattacc
tcactcagcgcacgggtcgctttgtacaaaggcgcactgtcagcaatcagcaaggacccg
ttgaccggttacggcccgcaaaacaggatggcctcggtcttggcggaactgccagacagc
atgcggccatacttgaccttctcgcatgttcataatggctttctgacagcgggaattgac
gccggcgttgtcggcatcgcggcgctttcgctgctgctcctgacgcccgtgatagccgcg
tggaaaaaggaacccggtcctggcagggacctgtccatagcgctcgctcttctgctcacc
agcagctacgtagttaccggcagcgtcggcatcatgttcaatcagaaggcactggatccg
atcttcgcctatatggtcgccctgatttgcttggatcggggcagcacaggcttcgcgcct
gtcgtgcgaagctga
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