Rhizobium sp. Kim5: Kim5_PD00347
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Entry
Kim5_PD00347 CDS
T05501
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00520
Amino sugar and nucleotide sugar metabolism
rhk01100
Metabolic pathways
rhk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Kim5_PD00347
Enzymes [BR:
rhk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
Kim5_PD00347
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
ARQ62352
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Position
pRetKim5d:351113..352156
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AA seq
347 aa
AA seq
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MLQGNRRGKGKTVLVAGGAGFVGSHICDALLARGDSVICVDSYITGSRDNVRPLTNHPRF
RLVEQDVCQFLDIGEPLDQIYNLACAASPPQYQADPVHTMMTCVAGTGNLLALAERHAAS
FLQASTSEVYGDPAEHPQREDYRGNVSCTGPRACYDEGKRAAEALCFDMLRARRVDARVA
RIFNTYGPRMQANDGRIVSNLIVQALSGKPLTIYGSGMQTRSFCYVSDLVGGLMALMDVT
PNPGMPVNLGNPGEFTINELAQMIRSMVPRKTVIVYRPLPKDDPQRRRPDISRATDLLDW
RPTVPLAEGLGYTVEWFANSLGGRVRRAAAPRRPRNVAVSQAAPAQS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagggaaatcgtcgcggtaaaggcaagactgttctggtggcaggaggtgccggt
ttcgtcggttcgcatatctgcgacgcgctcctcgcccgtggcgattccgtcatttgcgtc
gacagctatatcaccggctcgcgcgacaatgtccggccattgacgaaccatccgcgcttc
cggctcgtggaacaggatgtttgccagttcctggacatcggcgagccgcttgaccagatc
tacaatctggcctgcgccgcgtcgccgccgcagtatcaggcagaccccgtccacacgatg
atgacttgtgtcgccggtacaggcaacctgctggcgctggccgaacggcatgccgcgtct
ttcctccaggcctcgaccagtgaggtctacggcgatccggccgaacatccgcaacgtgag
gattaccggggcaatgtcagctgcaccggaccgcgggcctgctatgacgagggaaaacgc
gcggcggaagcgctttgcttcgacatgttgcgtgcccgtcgcgtcgatgctcgggttgcg
cgtattttcaacacctatgggccgcgcatgcaggcgaatgatggccgtatcgtttccaac
ctgatcgtccaggcgctttcgggaaaaccccttaccatctatgggagcggcatgcagacg
cgatcattctgctatgtcagcgatctggtcggcggtcttatggcgctgatggatgtcacg
cctaatcccggaatgccggtcaatctcggcaatcccggcgaattcaccatcaacgaactc
gcccagatgatccgttcaatggtgccgagaaagaccgtcatcgtctacaggccgctgccg
aaggacgacccgcagcgccgccgtcctgatatttcccgggcgacggaccttctcgactgg
cggccgacggtgccgcttgccgaaggtcttggatacacggtggagtggtttgccaatagt
ctcggtggccgtgtgcggcgcgcagcggcgccccgccggccacggaacgtcgctgtttcg
caggcggcccccgcgcaaagctga
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