Rhizobium sp. Kim5: Kim5_PD00375
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Entry
Kim5_PD00375 CDS
T05501
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02010
ABC transporters
rhk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Kim5_PD00375
03070 Bacterial secretion system
Kim5_PD00375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PD00375
02044 Secretion system [BR:
rhk02044
]
Kim5_PD00375
Transporters [BR:
rhk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Kim5_PD00375
Secretion system [BR:
rhk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Kim5_PD00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
AAA_21
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
AAA_30
UQCC3
MoeA_C
DUF6170
AAA_15
PRK
MobB
Motif
Other DBs
NCBI-ProteinID:
ARQ62380
LinkDB
All DBs
Position
pRetKim5d:393767..395911
Genome browser
AA seq
714 aa
AA seq
DB search
MSGFLHTNLHCLALVARHHGVDLAPERLQHDYAVGNDPVAVRQLLRMAKDAGLRARHLTL
DWRSLFQLGEAFPVLAELTNGNWVVIADAVGSGEEERIRVLDPLASRAEAMMLSEEQFAK
AWLGSVVLLKRNYRMSDEDRPFGFRWFVPEIIRQRSFFRDVALAAFVLYGLGLTTPMFFQ
LVIDKVLVHQSYATLTVLTVGIGVALIFDATFSFLRRYLLLYATNRIDIRVATRTFGHLL
NLPIALFEQASAGVLVKHMQQTGRIREFLTGRLFLTLLDGVSLFVFVPILLLYSVKLTLV
VLGFAALVGLVVMLLVGPFQRRLQALYQAEGDRQALLVETVHGMRTVKSLALEPRQRKVW
DDYSAQSISVRFRVEKISTIAQSMTGLLEKLMSVAIIGLGALDVFNGAMTIGALVAFNML
AGRVSGPLVQIVTMVHEYQEVALSVRMLGEIMNQRPEQAGRGRGVRPRLQGRIEFDRVTF
RYAADSAPALDNVSFAIPAGSVFGVVGKSGSGKTTITRLIQGLYQSQEGLVRMDGYDSRE
IDLVHLRTSIGVVLQDNFLFRGSVRDNIAAAKPDASIEEIMEVARIAGAEEFIERLPRGF
DTLLEENAANLSGGQKQRLAIARALITDPKLLIFDEATSALDPDSEAIIRDNLSRIAAGR
TVIIVSHRLSTLVNADAILVVERGKVADIGRHDQLVSRCMTYRHLWSQQMRQVA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttttctgcataccaacctgcattgtctggcgctcgtcgcgcgacatcacggc
gttgatcttgctcctgagcgattgcagcacgattatgccgtcggcaacgatcccgttgcc
gtgcggcagctgctgcgcatggccaaggatgccggcctcagagcccggcatctgacgctc
gactggcgatcgctgtttcagctcggcgaggcctttccagtgctcgcggaactgacgaac
ggcaattgggtggttatcgccgacgctgtcggaagcggcgaggaggagagaattcgcgtt
ctcgacccgctcgcctcacgcgccgaagcgatgatgctcagtgaagagcagttcgccaag
gcctggctcggatcggtggttctgctgaaacgcaattatcgcatgtccgatgaggaccgg
cctttcggtttccgctggttcgtccccgaaatcatcaggcagcgcagcttcttccgagat
gtcgcgctggcagccttcgtcctttacggcctcggactgacgaccccgatgttctttcag
ctcgtgatcgacaaagtgctcgtccatcagagctatgcaacactgacggttctaactgtc
ggtatcggcgtggctctcatcttcgatgcgactttcagcttcctgcgccgctatttgctg
ctctacgccaccaacaggatcgacatccgggtggcgacccgcaccttcggccatctgctc
aatctgccgatcgcgctcttcgagcaggcttcggccggcgttctcgtcaagcatatgcag
cagaccgggcgtatccgcgaattcctgaccggccggctgttcctgacgcttctcgatggc
gtgtccctcttcgtcttcgtgccgatcctgcttctctacagtgtcaagctgacgctcgtg
gtcctgggcttcgcagcgcttgtcggcctggtggtgatgctgctggtcgggccgttccag
cgccgtctgcaggcgctctaccaggcggaaggcgaccggcaggccctgttggtggaaacc
gtgcacggcatgcgcaccgtcaaatcgctggcgctggaaccgcgccagcgcaaagtgtgg
gacgattattcggcccagtcgatctcggtgcgcttccgggtcgagaagatttcgaccatc
gcccaatcgatgaccggccttctggaaaagctgatgagcgtggcgatcatcggcctcggc
gcgctcgatgtcttcaatggcgcgatgacgatcggcgcgcttgtcgccttcaacatgctc
gccggccgcgtctccggcccgctggtgcagatcgtcaccatggtgcatgaatatcaggaa
gtggcgctgtccgtgcgcatgctcggcgagatcatgaaccagcggccggagcaggcgggc
cgggggcggggtgttcgcccgcgtctgcagggccgcatcgagttcgaccgggtcaccttc
cgctacgctgccgacagcgcgccggcgctcgataatgtctccttcgccattccggcgggc
tcggtgttcggcgtggtcggcaagagcggttcgggcaagacgacgatcacccggctcatc
caggggctctatcagagccaggaagggctggtgcgcatggatggttatgacagccgcgag
atcgacctggtgcaccttcgaaccagcatcggcgtcgtgctgcaggacaatttcctgttc
cgcggctcggtccgtgacaatatcgccgccgccaagcccgatgccagcatcgaggagatc
atggaagtcgcccgcatcgccggcgccgaggagttcatcgagcgcctgccgcgcggcttc
gacacgctgctggaggaaaacgccgccaacctgtcgggcggccagaaacagcggctggcg
attgcccgcgcgctgatcaccgatccgaagctgttgattttcgatgaggcgaccagcgcg
ctcgaccctgacagcgaggcgatcatccgcgacaatctcagccgcatcgcggccggccgc
accgtcatcatcgtctcgcaccggctttcgacgcttgtcaatgccgatgccattctcgtc
gtcgagcgtggcaaggtcgccgatatcggccggcacgatcagcttgtgtcgcgctgcatg
acctatcgccacctttggtcccagcagatgaggcaggtcgcatga
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