Rhizobium sp. Kim5: Kim5_PD00389
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Entry
Kim5_PD00389 CDS
T05501
Symbol
rbsB-3
Name
(GenBank) ribose ABC transporter substrate-binding protein RbsB 3
KO
K10439
ribose transport system substrate-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02010
ABC transporters
rhk02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Kim5_PD00389 (rbsB-3)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Kim5_PD00389 (rbsB-3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PD00389 (rbsB-3)
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Kim5_PD00389 (rbsB-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ARQ62394
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All DBs
Position
pRetKim5d:complement(410271..411272)
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AA seq
333 aa
AA seq
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MAVLAATFIAGSAAAATENPFRCKPGEKYVMNVMVSGVEYWFPVYEMFKQAGQQLGCETE
YTGTPEYDVNKQIATFDQALAQNPAGILVHPMNSDPFIEPINRAIGQGTAVVTFAADSPL
SKRVSFITSDNTREGTYAADAIAEKMGGKGEYAVLENPGQDNHDKRIAAFIARMEEKWPD
MKLVGRAASNQDPTKAYQGLSSLIQANPNLGAVFMPEANSAIGAAQANKETGGKVLVMCA
DVNANILDMIKAGEVFGSINPNQGMQGYMGFMLLWLAKHPELIDPMNDAKRSGFNPMSIP
VVDNGLSIVTAANADDFYWDKYLKHRGTKGIEE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcttgctgcaacgtttatcgccggctccgccgccgctgcgacggagaacccg
ttccgctgcaagccaggcgaaaaatacgtcatgaacgtcatggtttcgggcgtcgaatac
tggttccccgtctacgagatgttcaagcaggcggggcagcagctcggctgtgaaacggaa
tataccggcacgccggaatatgacgtcaacaagcagatcgccaccttcgatcaggcgctg
gcgcaaaatccggccggcattctcgttcatccgatgaactccgacccgttcatcgagccg
atcaaccgcgccatcggccaaggcaccgcggttgtcaccttcgccgccgactcgccgctc
tccaagcgcgtctccttcatcacctcggacaacacccgcgaaggcacctatgccgccgat
gcgatcgccgagaagatgggcggcaagggcgaatatgccgttctggaaaatcccggtcag
gacaaccacgacaagcgcatcgctgccttcatcgcccgcatggaagagaagtggcctgat
atgaagctcgtcggccgcgccgcatccaaccaggatccgaccaaggcctatcaagggctt
tccagcctcatccaggccaatccgaacctcggggcggtcttcatgccggaagcgaattcg
gcgatcggcgccgcgcaggccaacaaggaaaccggcggcaaggtcctcgtcatgtgcgcc
gacgtcaacgccaacattctcgacatgatcaaggctggcgaagtcttcggctcgatcaac
cccaaccagggcatgcagggttacatgggcttcatgctgctgtggctcgccaagcacccg
gaactgatcgatccgatgaacgacgccaagcgctcgggcttcaacccgatgagcatcccg
gtcgtcgacaacggcctctccatcgtgaccgccgcaaatgccgacgacttctattgggac
aagtacctgaagcatcgcggcacgaagggcatcgaggaataa
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