Rhizobium sp. Kim5: Kim5_PD00436
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Entry
Kim5_PD00436 CDS
T05501
Symbol
codA
Name
(GenBank) cytosine deaminase
KO
K01485
cytosine/creatinine deaminase [EC:
3.5.4.1
3.5.4.21
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00240
Pyrimidine metabolism
rhk00330
Arginine and proline metabolism
rhk01100
Metabolic pathways
rhk01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Kim5_PD00436 (codA)
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Kim5_PD00436 (codA)
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.1 cytosine deaminase
Kim5_PD00436 (codA)
3.5.4.21 creatinine deaminase
Kim5_PD00436 (codA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidohydro_3
Amidohydro_1
ESR1_C
BenE
Motif
Other DBs
NCBI-ProteinID:
ARQ62440
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All DBs
Position
pRetKim5d:458219..459508
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AA seq
429 aa
AA seq
DB search
MFDLIVRNANLPDGRTDIDIGIEGDRIIAVERNLQAHAPEEIDATGRLVSPPFVDPHFHM
DATLSLGLPRMNVSGTLLEGIALWGELRPIVTKEELVDRALRYCDLAVTQGLLFIRSHVD
TSDPRLVTVEAMIEVRERVAPYIDLQLVAFPQDGYYRSPGAIDALNRALDMGVDIVGGIP
HFERTMGDGTASVEALCRIAADRGLPVDMHCDETDDPLSRHIETLAAQTIRFGLQGRVAG
SHLTSMHSMDNYYVSKLIPLMAEAEINVIPNPLINIMLQGRHDTYPKRRGMTRVRELMDA
GLNVSFGHDCVMDPWYSMGSGDMLEVGHMAIHVAQMAGIDDKRKIFDALTVNSVKTMGLA
GYGLEKGCNADLVILQASDTLEALRLKPNRLAVIRRGKVIARTEPRIGELFLNGRPARID
PGLDYIPRY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatctaatcgtcagaaacgcaaatctccccgatggccgaaccgacatcgacatc
ggcattgagggcgacaggatcatcgccgtcgagcgcaatctgcaggcgcatgcgccagag
gaaatcgacgcaaccggcaggctggtcagcccgcccttcgtcgatccgcattttcacatg
gacgccacgctgtcgctcgggctgccgcgcatgaacgtctccggcaccttgctcgaaggc
atagcgctctggggagagttgcgaccgatcgtgaccaaggaggaactggtcgatcgcgcg
ctgcgctattgcgatctcgcggtcacgcaaggcctgctttttatccgcagccatgtcgat
accagcgatcccagactggtgaccgtcgaggcgatgatcgaagtccgcgaaagggtcgcg
ccctatatcgatttgcaactggtcgcctttccccaggacggttattaccgctcgccgggg
gcgatcgacgcgctcaaccgggcgctcgacatgggcgtcgatatcgtcggtggcattcct
cacttcgaacggacgatgggcgacggcaccgcgtcggtcgaggcgctctgccgcatcgcc
gccgatcgcggcctgccggtcgacatgcattgcgacgaaaccgacgatccgctctcgcgc
catatcgagacgctggccgcccaaaccatccgcttcggcctgcagggacgtgtcgccggc
tcgcatctgacctcgatgcattcgatggacaattattatgtttccaagctcatcccgctg
atggccgaggcggagatcaatgtgatccccaacccgctgatcaacatcatgctgcagggc
cggcacgatacctatccgaaacgccgcggcatgacccgggtgcgcgagctgatggatgcc
gggctgaatgtctccttcgggcacgattgcgtcatggatccctggtattcaatggggtcc
ggcgacatgctggaggtcggccacatggcgatccatgtcgcgcagatggcgggcatcgac
gacaagaggaagattttcgacgcgctgaccgtcaattcggtgaagacgatggggctcgca
ggctacggactggagaaaggatgcaatgccgatctcgtcatcctccaggcgagcgacacg
ctggaagcattgcggctgaagcccaatcggctggcggtgatccgccgcggcaaggtcatc
gcccgcacggagccgcgcatcggcgagctttttctgaacgggcgtccggcccggatcgac
cccggcctggactacatacctcgctattga
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