Rhizobium sp. Kim5: Kim5_PD00470
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Entry
Kim5_PD00470 CDS
T05501
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit 2
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00190
Oxidative phosphorylation
rhk01100
Metabolic pathways
rhk02020
Two-component system
Module
rhk_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Kim5_PD00470 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Kim5_PD00470 (cydB)
Enzymes [BR:
rhk01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
Kim5_PD00470 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
ARQ62474
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Position
pRetKim5d:494572..495726
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AA seq
384 aa
AA seq
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MILHELIDYETLRLIWWLLLGVILIAFATTGGFDLGVGTLLPFVARTDAERRVAINTIGA
TWEGNQVWLILGGGAIFAAWPPLYAVSFSGFYLAMFAILFALILRPVGFKYRSKRESVRW
RNAWDWTLFIGGFVPALIFGVAVGNVLQGVPFRFADDMRIFYEGSFFALLNPYALLCGLL
SVAMLTMHGAAWLVLKASGPVAERARSYGSIAALAAIVLFALGGLFLWIGVGGYRIASDI
SPIGPSNPLLKSVVIENGAWLANYNAHPWMILAPVLGFAGAALALLAMRAGREVTTLIFS
KMAILGIISTVGLAMFPFILPSSLDPRSSLTVWDASSSHMTLFIMLVVTVIFLPIIVAYT
AWVYKVLWGKVDEKSVTDKNSHAY
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgatccttcacgaactcatcgactacgaaaccctgcgcctcatctggtggctactgctc
ggcgtgatattgatcgcttttgcaacgacaggcggcttcgatctcggagtcggcacgctt
ttgccctttgttgccaggaccgatgcggagcggcgcgtggcgatcaacacgatcggcgct
acctgggaaggcaaccaggtctggctgatcctcggcggcggcgccatcttcgccgcctgg
ccgccgctgtatgcggtctccttctcgggcttctatctcgccatgttcgcgatccttttc
gcgctcatcctgcgcccggtcggcttcaaataccggtcgaaacgggaaagcgtccgctgg
cgaaacgcctgggactggacgcttttcatcggcgggttcgtgccggcgctgatcttcggc
gttgccgtcggcaacgtgctgcagggcgtgccgttccgctttgccgacgacatgcggatc
ttctacgaaggctcgttctttgctttgctcaacccctatgcgctgctctgcgggctgttg
tccgtcgccatgttgacgatgcacggcgccgcctggctggtcttgaaggcgagcgggccg
gtggcggagcgggccagaagctatggcagtatcgccgcccttgccgccatcgtgctcttt
gccctcggcggcctcttcctatggatcggcgttggcggctatcgcatcgccagcgatatc
agcccgatcggaccgtcaaacccgctgctgaagagcgtggtgatcgagaatggcgcatgg
cttgccaattacaacgcccatccgtggatgatcctggcgcctgtcctcggctttgcaggt
gcggcactggccttactcgcaatgcgggcaggacgcgaggtgacgacgctcatcttcagc
aagatggcgatactgggcatcatctccacggtcggtctggcgatgttcccgttcattctg
ccctcctcgctcgatccgcgatcgagcctgacggtctgggatgcatcctccagccatatg
acgctgttcatcatgctggtcgtgacggtgatcttcctgccgatcatcgttgcctacacc
gcctgggtctacaaggttttgtggggcaaggtcgacgagaagtcggtcaccgacaagaac
agtcacgcctactga
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