Rhizobium favelukesii: LPU83_0005
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Entry
LPU83_0005 CDS
T03046
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03030
DNA replication
rhl03430
Mismatch repair
rhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPU83_0005 (dnaQ)
03430 Mismatch repair
LPU83_0005 (dnaQ)
03440 Homologous recombination
LPU83_0005 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhl03032
]
LPU83_0005 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_0005 (dnaQ)
Enzymes [BR:
rhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPU83_0005 (dnaQ)
DNA replication proteins [BR:
rhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPU83_0005 (dnaQ)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPU83_0005 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
NYAP_N
Motif
Other DBs
NCBI-ProteinID:
CDM55696
UniProt:
W6RN93
LinkDB
All DBs
Position
3102..3812
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AA seq
236 aa
AA seq
DB search
MREIIFDTETTGLDNRVDRIIEIGGIELFNHFPTGNTIHIYINPGDQKVHPDALAVHGIT
DEFLKDKPSFADVAQRIIDFFGDARWIAHNATFDMGFINAEFARLELPPILPDRVLDTLS
MARRKHPMGPNSLDALCRRYGIDNAHRTKHGALLDSELLADVYIEMIGGRQAALGLGNAA
SNSAGQEIVVEEINIGTLERPRPLASRLSEAEQQAHDALIAKLGAKGVWGKYDLAN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcatcttcgatacggaaaccacgggtttggacaaccgcgtggaccgtata
atcgagatcggcggcatcgagcttttcaatcatttcccgaccggcaatacgatccacatc
tacataaatccgggggaccagaaggtacacccggacgcactcgctgtgcatgggattaca
gatgagtttctgaaggacaagccttcgtttgccgatgttgcgcagcggattatcgatttc
tttggcgatgcgaggtggattgcgcacaatgccacattcgatatgggctttataaacgct
gaatttgctcgacttgagctgccgccgatcttgcccgatcgggtgctcgatacgctgtcc
atggcgcgccgcaagcatccaatgggtcccaattcgctcgacgcgctttgccgccgctac
ggcatcgacaatgcgcatcgaacgaagcacggcgcgctcctcgactccgaactgcttgcc
gatgtctacatcgagatgatcggcggccgccaggctgcacttgggcttggaaatgccgcg
agcaactcggccggtcaggaaatagtagtcgaagaaatcaacatcggcacgctcgaacgg
ccacggccccttgcgtcacgtctcagcgaagccgagcagcaagcccatgacgcactcatc
gccaaactcggcgcgaagggtgtttggggaaaatacgatcttgcaaactaa
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