Rhizobium favelukesii: LPU83_0027
Help
Entry
LPU83_0027 CDS
T03046
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_0027 (addB)
Enzymes [BR:
rhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPU83_0027 (addB)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LPU83_0027 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CDM55718
UniProt:
W6RAN6
LinkDB
All DBs
Position
complement(25436..28630)
Genome browser
AA seq
1064 aa
AA seq
DB search
MAEQHWPRVWTIPAGLPFLKTLAESLCAGRLTPHFRYDPGDPLSLSKVTIYLPTRRAARV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATLDLAQPLSNTARLLELARLIL
AWRNRLPEIVRSIHSDSPLVAPASPADAIWLARNLAELIDAIETEDRDWSELSRLNAKDY
ALWWQLTAEFLQIASAFWPERLNELGKSSPARHRNAILRAEANRLATVPPMGPIIIAGST
GSVPATADLIAAVANLREGVIILPGLDLGMPDEHWRMVAPGDRKDQPADPASRSHSQYGL
AQLLRRLNLTREDVVPLAEPAEGLQQRSQILSHAQSPAEATSDWGAWKARLSDVAISSAF
ADVSLIEAGNEREEATAIAIALRLALERPGKDGESRAALITPDRNLARRVTTELSRFGIV
ADDSAGTPLSATPQGTLLQLLLEATLRPGDPVAIVGLLKHPLARFGLERSVLVAAVAALE
LLALRGGVADVDIAALEPLLEQQLSEQALDRHAPQWRKALPADAVDRARDLARRVAGATE
PLASVLVRNLSEERGLTTSLALSDWARRTGHALEAVAGDERGDLAGLWSGEAGDTLASML
GEVIETEGQIDADGPQWIDIIAALLAGQAAKPRALSHPRLFIFGTLEARLQSVDTLVLGG
LNEGSWPGQTSNNPFVSRTMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLAFCGKEFEAELKGRGDNFVHWANLIDQGDRQAPAQRPSPTPPLEMQPK
SYSFSEVGRLRRDPYAIYARRVLRLDPVAPFNRDPGAAERGTLYHKIIDRFVREGHIAGT
QAAEAAMEVILTELFDMEQLPAHVDAVWRPRFREVARSFLEWEAQRQPGIRRTLTEVRGG
VELEPINVRLSGVADRIDITGTGIADIIDYKTGHNPSPAQARTLLDPQLALEAAALHAGA
FQEAGSLVPQDLLYVRLRPGDRFKVDTVNDETSTRNDKAKSAMDLAADSIDQLVKFVSLL
QSGEKGFTSRLVPAQQFDFGGDYDHLARVSEWSAAESDEAIGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcagcactggccgagggtctggaccatccccgcagggcttcccttcctgaag
acccttgccgaaagcctctgtgccggcaggctgacaccgcatttccggtatgaccccggc
gatcccctatcgctttcaaaagtcacgatctatctgccgacaaggcgtgccgcacgcgtg
ctccgctccgaattcgtcgaccttcttggtgggcgatcagcaatcttgccggtcatccgc
ccgcttggtgaaaccgacgacgacagcgggtatttcgacgaagccctgccagcgacattg
gatcttgcgcagccgctctcaaacaccgcccgcctgttggaactcgcgcgccttatcctt
gcctggcgaaacaggctgccggagatcgtgcgcagcatccactccgattcgccgctcgtc
gcacccgcaagccccgccgacgccatttggcttgcccgcaacctcgcggaattgatcgac
gccatcgagactgaggatcgagactggagcgaactgtcccgcctgaacgcgaaagactat
gcgctctggtggcagctgacggccgaattcctgcagatcgccagcgccttctggccggag
cgactgaatgagcttggcaaatcgtcgccagcaaggcaccgcaacgccatccttcgtgcc
gaagcaaatcgtctcgcgacagtcccaccgatgggacccatcatcattgcaggatcgacg
ggctcggtgccggcgacagccgacctgatcgcggcagtcgccaaccttcgggaaggcgtc
atcattctgccgggcctcgacctcggcatgccggatgagcattggcgaatggtagcgccg
ggcgatcggaaagatcagcctgcagatccggcgagccgcagccactcgcaatacggcctc
gctcagctgctgaggcgactgaacctcacccgcgaggacgtcgtgccgctggcagagcca
gccgaggggttgcagcagcgcagccaaatcctctcgcatgcgcagtcgccagccgaagcc
accagcgattggggcgcgtggaaggcaaggctatccgatgtggccatttcatcggcattc
gcagatgtgtcgctgatcgaggcgggcaatgagcgagaggaagccacggccatcgcaatc
gccctgcgcttggctcttgagcggcccggcaaggacggtgagagccgggcggcgctgata
acgcctgatcgaaatctagcgcgccgcgtgaccacggaattatcgcgtttcggcatcgtc
gctgatgactccgcaggcacgccgctttccgcgacgccacagggaacattgctgcaactg
ctgctcgaagcaacgcttcgcccgggtgatcccgtcgcgatcgtcggcttgctcaagcat
cccctggcgcgcttcggcctggagcgcagcgtgcttgtcgcggcagtcgcggcactcgag
ctgctggcgctgcggggtggcgtcgccgacgtcgacatcgccgcgctagaaccgctcctt
gaacaacaattgtcggagcaggccctggatcgtcacgcgccgcaatggcgcaaggcgctc
cccgccgatgcagtcgatcgcgcgcgggatcttgcccgccgcgttgccggagccactgaa
ccgcttgcatccgtgcttgtccgaaacctatccgaggagcgaggactgacgaccagctta
gcactttccgactgggccaggcgcacggggcacgcactggaggcagtggcaggcgacgag
cgtggtgaccttgccgggctctggtcgggggaggcaggcgacactctggcgtcaatgctc
ggcgaagtcatcgaaaccgaaggacagatcgatgccgacggtccacagtggatcgatatc
atcgcagcgctgttggccggccaggcggcaaaaccacgggcgctcagccatccaagactg
ttcatcttcggcacgttggaagcgcgcctccagagcgtagacactctcgtcttgggaggg
ctgaacgaaggatcatggccggggcaaacatccaacaaccctttcgtttctcgcacaatg
aagacggagattgggctggagccaccggagcggcgaatcggccagctggctcacgatttc
gaaatggccaacggcacgcgtcacctcatctattcgcgggcactccggcaaggttcgaca
ccgaccgttgcatcacgctggctgcagcggctgctcgcgttctgcgggaaagagttcgag
gccgaactcaagggccgcggcgacaactttgtgcattgggcaaacctgatcgaccaaggt
gaccgccaggcgcctgcgcagcgtccaagtccaacgccgccgctggaaatgcagccgaag
tcgtactcgttcagcgaggttggacgtctgcgtcgcgacccttatgcgatctatgcgcgg
cgcgttctccgcctcgatccggtggctcccttcaaccgagaccccggcgccgcagagcgg
ggaacgctctatcacaagattatcgaccgcttcgtgcgtgaaggccacattgccggaaca
caggcggcggaagcggcgatggaggtcattctgaccgagctcttcgatatggagcaactt
ccggcgcacgtcgatgccgtctggcgtccgcgctttcgggaggttgcccgttcgtttctc
gagtgggaggcgcaacgacagccgggcattcgaagaacgctgacagaggtgcgcggcggt
gtcgagctagagcccatcaatgtccggctgagcggtgttgccgaccggatcgacatcacg
ggaacgggtatcgccgacatcatcgactacaagaccggacacaatccttctccggctcag
gcgcgcaccctcctcgatccccaactggcgctggaggcggccgcgctccacgcgggcgct
ttccaggaggcgggcagtctcgttccgcaggatctcctctatgtacgtctgcggccggga
gatcgcttcaaggtcgacaccgtcaacgacgagacatcgaccagaaacgacaaggcgaag
tcagccatggacctggccgcggactcgatcgatcaactggtaaagtttgtctctcttctg
caatcaggcgagaagggcttcacctcgcggcttgtgccggcacagcagtttgacttcggc
ggcgactacgatcatctagcgcgcgtttccgaatggtctgccgcagagagcgatgaggca
atcggcgatgaatga
DBGET
integrated database retrieval system
