Rhizobium favelukesii: LPU83_0137
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Entry
LPU83_0137 CDS
T03046
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhl03016
]
LPU83_0137 (truB)
Enzymes [BR:
rhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LPU83_0137 (truB)
Transfer RNA biogenesis [BR:
rhl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPU83_0137 (truB)
Prokaryotic type
LPU83_0137 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
CDM55823
UniProt:
W6RAT2
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All DBs
Position
138815..139747
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AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLFKAQKCGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERATDDLEGDVTQSSDARPSEQQIRDLLPKYTGVI
SQVPPQFSAIKIAGERAYDLARDGEAVDIPSREVEIFRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELRSYGHISGLRRSFVAPFAEETMVPLADLVALEAIEDADERLAALDAL
LIDTSEALSSLPHLVVNDDQAHRLKMGNPILVRGRDAPVAESEAYATARGKLIAIGEIGQ
GEFRPKRVFG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgtaaaccgaagggccgcccgatctccggttggctgatccttgataag
ccggtcgatttcggctccaccgaagccgtttccaagatcaagtggctgttcaaggcgcag
aagtgcggtcacgccggcacgcttgacccgctggcttcgggcatgctgccgattgcgctc
ggtgatgcgacgaagaccgttccctacgtgatggacggccgcaagatctacgaattcaca
gtgacctggggcgaggaacgcgcaaccgacgatctcgagggcgatgtgacccagagctcc
gatgcgcgcccgagcgagcaacagatccgcgatctcctgccgaagtataccggcgttatc
agtcaggttccgccgcagttctccgcgatcaagattgccggcgagcgcgcctatgatctg
gcccgtgacggcgaggccgtcgacatcccctcccgtgaggttgaaatcttccgtctcacg
ctgcttgcctgcccggatgccaatacagcgcatttcgaagtcgaatgcggcaagggcacc
tatgtccgggcgctggctcgcgactttggccgcgaactccgcagctatggccacatctcc
ggcctgcgccgcagttttgttgcgccctttgccgaagaaacaatggtgccgctcgccgat
ctcgtcgcgctcgaggcaatcgaggacgcggacgagcgacttgctgcactggacgccctt
ctgatcgacacgagcgaagcgctttcttcgctgccgcatctcgtcgtcaacgacgaccag
gcacaccggctgaagatgggcaatccgatcctcgtgcgtggccgggatgcgccggttgcc
gaaagcgaagcctacgccacagcccgtggcaagctgatcgcaatcggcgagattggccag
ggcgagttccgtccgaagcgcgtcttcggctga
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