Rhizobium favelukesii: LPU83_1602
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Entry
LPU83_1602 CDS
T03046
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPU83_1602 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhl03021
]
LPU83_1602 (rpoA)
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_1602 (rpoA)
Enzymes [BR:
rhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPU83_1602 (rpoA)
Transcription machinery [BR:
rhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPU83_1602 (rpoA)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPU83_1602 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
CDM57270
UniProt:
W6RA67
LinkDB
All DBs
Position
1570429..1571439
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSSRIKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLNMTIETDGSISGEDAVAFAARILQDQLGVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaactggcaggaattgatcaagccgaacaaggtcgagttctcgtcgagc
tcgcgcatcaaggcgacgctcgtagcagagccgcttgagcgtggtttcggcctcaccctc
ggtaacgcgcttcgccgcgttctgctgtcctcgctgcgcggtgccgcagtcacggctgtg
cagatcgatggcgtgctgcatgagttctcgtcgatcccgggcgtccgcgaagacgtgacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgatgacgcaaagcgc
atggtcgtgcgtaagcagggccctggcgttgtaacggctggcgacatccagacggtcggt
gacattgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggtgcggaaatt
cgtatggaattcaccgtcaacaacggcaagggctatgttccggccgatcgcaatcgtgcg
gaagatgctccgatcggtctcatcccggtcgacagcctttattcgccggtcaagaaggtg
tcctacaaggtagaaaatacccgtgaaggacaggttctcgactacgacaagctgaacatg
acgatcgagaccgacggttcgatctccggcgaagatgccgtcgctttcgcggctcgcatt
ctccaggatcagcttggcgtgttcgtcaacttcgacgagccgcagaaggaaaccgaagag
gaagcagttaccgaactcgctttcaacccggcgctcctcaagaaggtggacgaactcgaa
ctgtctgttcgctcggcaaactgcctgaagaacgacaacatcgtctacatcggtgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgctacgaagaccaatactaa
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