Rhizobium favelukesii: LPU83_1691
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Entry
LPU83_1691 CDS
T03046
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhl03032
]
LPU83_1691 (topA)
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_1691 (topA)
Enzymes [BR:
rhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPU83_1691 (topA)
DNA replication proteins [BR:
rhl03032
]
Prokaryotic type
DNA Topoisomerases
LPU83_1691 (topA)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPU83_1691 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
CDM57356
UniProt:
W6RSU7
LinkDB
All DBs
Position
complement(1657355..1660003)
Genome browser
AA seq
882 aa
AA seq
DB search
MMNVVVVESPAKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASA
KRIKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKTVKRVVFNAITKKA
VLDAMAEPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCD
RESEIERFISEEYWNLSALLKTPRGDEFEAKLVAANGKRLQARSIANGEEAGTLKALLEG
ATYVVDTVEAKPVKRNPGPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDIGGETVG
LITYMRTDGVQMAPEAIDAARAAIVDQFGQRYMPEKARFYSTKAKNAQEAHEAIRPTDFN
RSPDRVRQFLDADQLRLYDLVWKRGIASQMASAEIERTTAEITADNNGQKAGLRAVGSVI
RFDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARENLAKQKINSTQHFTEPPPRYSEASL
IKKMEELGIGRPSTYAATLATLRDREYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDF
TADLEEKLDRISAGELNWKQVLRDFWKDFFSQIEDTKELRVTNVLDSLNEALAPLVFPKR
EDGGDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLSSEGGSEAEGTGLNEPKN
LGTDPVTGEELTLRSGRFGPYIQRGDGKDAKRASLPKGWKPDDIDYEKAMALISLPRDIG
KHPETSKMISSGIGRYGPFLLHDGGYANLESVEDVFSIGLNRAVTVIAEKASKAPGGRAS
AAALKELGDHPDGGAITIRDGKYGPYVNWGKVNATLPKGTDPQALTVEEALALIAAKAGK
APASKSKAKPKAKAAAAETKTAKTAAKPKATKAKAPAKTKKS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgttgtagtggtggaatcgcctgccaaggcaaagacgatcaacaagtatctg
gggcccggatacaaggtgctcgcctccttcggccatgtccgcgatctgcctgccaaggac
ggctcggttcttcccgaccaggatttcgagatgttgtgggaggtcgatggtgcgtcagcc
aagcggatcaaggacatcgccgatgcggtgaagtcttccgacggcctgttccttgcaacc
gacccggatcgcgagggtgaagcgatttcctggcacgtcctcgacatgctgaacaaaaag
cgcgtcctgaacggcaaaacggtgaagcgggtcgttttcaacgcgatcaccaagaaagcc
gtcctcgatgcgatggccgaaccgcgcgacatcgacgtaccgctggttgatgcctatctg
gctcgccgcgccctcgattacctcgtcggcttcaacctttccccagttctttggcgcaag
cttccgggcgcgcgttcggcgggccgtgtgcagtcggtggcgcttcgcctggtttgcgat
cgcgaatccgaaatcgagcgcttcatctcggaagaatactggaacctttcggccctgttg
aagacgccgcggggcgacgaattcgaggcaaagctggttgcagcgaatggcaagcggttg
caggctcgctcgatcgcaaacggcgaggaagccggcacactgaaggcgcttctcgaaggt
gccacgtatgtcgtcgatacggtggaagcgaaaccggtcaagcgcaacccgggaccaccc
ttcacaacgtccacgctgcaacaggccgcttcatcgaagctcggcttttcggcgtcccgc
accatgcaggttgcccagaagctctatgagggggtcgacatcggtggcgagacggtcggt
ctgatcacctatatgcgtacggacggtgtgcagatggcgcccgaagccattgatgcggca
cgggctgccatcgtcgatcaattcggccaacgctacatgccggaaaaggcgcgcttctat
tccaccaaggcgaagaacgcccaggaagcccacgaagcaatccggccgaccgacttcaat
cgctcgcccgatcgagtgcgtcagttcctcgatgccgaccagttaaggctttacgacctt
gtctggaagcgtggtatcgcgagccagatggcctccgcggagatcgaacgcacgacggct
gagatcaccgccgacaacaacggccagaaggccggtctgcgcgctgtcggctccgtcatc
cgcttcgatggtttcatcgccgcctatactgaccagaaggaggacggcgaacagagcgac
gacggcgacgaagatggtcgcctgcccgagatcaacgcccgcgaaaacctcgcgaagcag
aagatcaattcgacccaacacttcaccgagccgccgccgcgctactcggaagcgtcgctg
atcaagaagatggaagagctcggcatcgggcgtccgtctacctacgccgcgacgctggcg
acgctgcgtgaccgggaatacgtcaccatcgacaagcgcaagctcattccgcaggcgaag
ggccggctggtgactgccttcctcgaaagcttcttcaccaagtacgtcgagtacgacttc
acggcagaccttgaagagaagctcgaccggatctcggcgggtgaactgaactggaagcag
gtcctgcgcgatttctggaaggacttcttctcccagatcgaggacacgaaggagcttcgc
gtcaccaacgttctcgactcgctcaacgaggcgctcgcgccgcttgttttcccgaagcgc
gaagatggcggggatccgcgcatctgtcaggtttgcggcaccggcaatctttcgctgaag
ctgggaaaatacggcgccttcgtcggctgctcgaattatccagaatgcaactatacccgt
cagctttcgtccgaaggcggttcggaagccgaaggcaccgggctgaacgagccgaagaat
ctcggcaccgacccggtgaccggcgaggaattgacgctgcgttccggacgcttcggcccc
tacattcagcgtggcgacggcaaggatgccaagcgtgcttccctgccgaagggctggaag
cctgacgatatcgactacgaaaaggcaatggcattgatttcgctgccacgcgatatcggc
aagcacccggaaaccagcaagatgatttcctccggcatcgggcgctatggaccgtttctc
ctgcacgatggcggctacgccaatctcgaaagcgtcgaggacgtgttctcaattggtctt
aaccgcgccgtcaccgtgatcgccgagaaggcgagcaaggcaccgggcgggcgggcgtca
gcggcagcgctgaaggaactcggcgaccatccggatggcggcgcaatcaccattcgcgac
ggcaagtatggcccctatgtgaactggggcaaggttaacgcgacgctgccgaagggcacc
gatccgcaggctctgacagtcgaggaagcgctcgcgctgatcgccgcaaaggcaggcaag
gcaccggcttcgaagagcaaggcaaaaccgaaggcgaaggccgcggcggccgaaacgaag
acggccaagaccgccgccaagccgaaggcgacgaaggccaaggcgccggcaaagacgaaa
aagagctga
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