Rhizobium favelukesii: LPU83_2164
Help
Entry
LPU83_2164 CDS
T03046
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPU83_2164 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_2164 (uvrB)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPU83_2164 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPU83_2164 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
Microtub_bd
UB2H
SWI2_SNF2
DUF87
Motif
Other DBs
NCBI-ProteinID:
CDM57821
UniProt:
W6RU40
LinkDB
All DBs
Position
complement(2103968..2107051)
Genome browser
AA seq
1027 aa
AA seq
DB search
MAKTPKKSPAPNGFEEAPQPSFEGAPLEGSVADWVKQLEADAEASGVETQRQIASKAGKH
RKKVEIAASKSARGTSMGGSTDPKTRAAAGLNPVAGMDTTLEEAASLQAGTAVTATVEAL
SALIESGNPLHKNGKIWTPHRPARPEKSEGGISIRMDSEYQPAGDQPTAIRDLVEGLENG
DRSQVLLGVTGSGKTFTMAKVIEQTQRPALILAPNKTLAAQLYSEFKNFFPDNAVEYFVS
YYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCIIVASVSCIYGIGSV
ETYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFPAHLEDAA
WRISMFGDEVDAITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLNAAIKSIKEELKGRL
VELEKAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRDPGDPPPTLFEYVPD
NAIVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPDTIA
VSATPGGWEMDQSGGVFAEQVIRPTGLIDPPVEVRSARSQVDDVLGEIRETAAKGYRTLC
TVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLD
IPECGFVAILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADNVTGSMKRAMEETGRR
REKQMAYNAEHGITPESVKAKISDILDSVYERDHVRADISGASGKGFADGGNLVGANLQT
HLNALEKQMRDAAADLDFEKAARLRDEIKRLRAVELAAMDDPLAREESRAMEGGRPRPSR
GAARPPQDEDGATTAAGSPRGGDAAASRGHSESPHREEAQRAVSNHEGGRGTSYFAKPGL
DDMGPGTDTATPLFRKPDRDEMGRDIAEPARKSLFRRNSLDEMTVGRTERPVSGALPEKP
GESIGTKKRASPLPSPSSSSGERSETRGPTDDPRPLVRGKTGIGSYEDPAEQKRKGRTKG
KTGRPGR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaactccgaagaaatctcccgccccgaatggcttcgaggaagccccacagccg
tcttttgaaggcgcccctcttgagggttccgtcgccgactgggtgaagcagttggaagcc
gatgcggaggcctccggcgtcgagacccagcggcaaatcgcctcaaaggcgggcaagcat
cgcaagaaagtggagatcgccgcgtcgaaatccgcacgcggcacgtcgatgggcggctcg
accgacccgaagacccgcgcggcagccggcctcaacccggttgcgggcatggatacgacg
ctggaggaggccgcctcgctgcaggccggcaccgccgtcaccgccactgtcgaggcactg
tcggcgctgatcgagagcggcaacccgctgcacaagaacggcaagatctggacgccgcac
cgtcccgcgcggccggagaaatccgagggcggcatctcgatccgaatggacagcgaatac
cagcccgccggcgaccagccgaccgccatcagggacctcgtcgagggcctggagaacggc
gaccgttcccaggtgttgctcggcgtcaccggctccggcaagaccttcaccatggccaag
gtgatcgagcaaacgcagcgcccggcgctcatcctggcgccgaacaagacgctcgccgcc
cagctctattcagagttcaagaacttcttccctgataacgccgtcgagtacttcgtctcc
tattacgactactaccagccggaagcctacgtcccgcgctccgacacctatatcgagaag
gaatcctcgatcaacgagcagatcgaccggatgcgccactcggcgacgcgctcgctgctc
gaacgcgacgactgcatcatcgtcgcctccgtgtcctgcatctacggcattggctcggtc
gagacctataccgccatgaccttccagatgaatgtcggggaccgactcgaccagcgccag
ctcttggccgacctcgtcgcccagcagtacaagcgccgcgacatggatttccagcgcggc
tccttccgtgtccgcggcgatacgatcgagatcttcccggcccacttggaagacgcggcc
tggcgcatctccatgttcggcgacgaggtcgacgccatcaccgagttcgacccgttgacc
ggccagaagaccggcgacctgaaatcggtgaagatctacgccaattcgcactatgtcacc
ccgcgcccgacgctgaacgctgccatcaagtcgatcaaggaggagctgaagggccgcctc
gtcgagcttgagaaggccggtcgcctgctggaggcccagcgtctggagcagcgcacccgc
tacgatattgaaatgctcgaagccaccggctcctgtcagggcatcgagaactattcgcgc
tacctcaccggccgcgacccaggcgacccgccgccgaccttgttcgagtacgtccccgac
aacgccatcgtcttcatcgacgaaagccacgtcaccgtgccgcagatcggcggcatgtac
cgcggcgacttccgccgcaaggcgacgctcgccgaatacggcttccgcctgccctcctgc
atggacaaccggccgctgcgcttcgaggaatgggacgcgatgcgccccgacaccatcgcg
gtctcggccacgccaggcggctgggagatggatcagtccggcggcgtcttcgccgaacag
gtgatccgcccgaccggcctcatcgacccgcccgtcgaggtccgctccgcccgcagccag
gtcgacgacgtgctcggcgagatccgcgagaccgcggccaagggctaccgcaccctctgc
accgtgctcaccaaacgcatggccgaagacctcaccgaatacctgcacgagcagggcgtg
cgcgtccgctacatgcactccgacatcgacacgctggagcgcatcgagatcatccgcgat
ctccgcctcggcgccttcgacgtgctcgtcggcatcaaccttctgcgcgaaggcctcgac
attcccgaatgcggcttcgtcgccatcctcgatgccgacaaggaaggcttcctgcgctcc
gaaacctcgctggtccagaccatcggccgcgccgcaagaaacgtcgacggcaaggtcata
ctctacgccgacaacgtcaccggctcgatgaagcgggcgatggaggaaaccggccgccgc
cgcgaaaagcagatggcctacaatgccgaacacggcatcaccccggaatcggtcaaggcg
aagatctccgacatcctcgactccgtctacgaacgcgaccacgtccgcgccgacatctcg
ggtgcgtcaggcaagggctttgcggacggcggaaacctcgtcggcgccaacctgcagacc
catctcaacgcgctggaaaaacagatgcgcgacgccgccgccgacctggacttcgaaaag
gccgcgcgtctgcgcgacgagatcaagcgcctcagggccgtcgaactcgcagccatggac
gaccctctggcccgcgaagaatccagggcgatggaaggcggccgccctcgtccttcgagg
ggcgctgcgcgaccgcctcaggatgaggacggagcgacgactgcagcgggtagccctcgg
ggtggggacgcagcagcgagccgtggccacagtgagagccctcatcgtgaggaggcccaa
agggccgtctcgaaccacgagggcgggcgaggaacctcctacttcgcaaagcccggcctc
gacgacatgggcccgggcaccgacaccgcaacgcccctcttccgcaagccggaccgagac
gaaatgggccgcgacatcgccgagcccgcgcgcaagagcctcttccgccgcaacagcctc
gacgaaatgaccgtcggccgcaccgaaagaccggtcagcggcgcgctgccggaaaagcca
ggggaatcgatcggtacgaagaagcgcgcctcgccgcttccctctccgtcgtcatcctcg
ggcgagcgcagcgagacccgaggacccaccgacgacccgcgccccctcgtccgcggcaag
acgggcattggctcctacgaggacccggccgagcaaaagcgcaagggcaggacaaagggg
aagaccgggcgaccggggcgctga
DBGET
integrated database retrieval system
