Rhizobium favelukesii: LPU83_2240
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Entry
LPU83_2240 CDS
T03046
Name
(GenBank) putative conserved protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhl01002
]
LPU83_2240
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhl01011
]
LPU83_2240
Peptidases and inhibitors [BR:
rhl01002
]
Cysteine peptidases
Family C82
LPU83_2240
Peptidoglycan biosynthesis and degradation proteins [BR:
rhl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LPU83_2240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
SNaCT10
Motif
Other DBs
NCBI-ProteinID:
CDM57897
UniProt:
W6R9F3
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All DBs
Position
2171723..2173597
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AA seq
624 aa
AA seq
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MTFLLRGAVSALALSCGIAAMGVAPAHAYTLMDMIRGDRARTQSTIVNPRSSVPSFLQSA
PDAPLPKVSSPRYYTYQPDAMRFVDTGKFTDPVVTGAVADASAVTETMPSVQRRFLIEAK
VRAPVDVAKALEAYYGDVKNPLVWLTGTDVNDRAKAAMAVLADAASVGLDAADYAVPVPT
EDPTNPDPAIRDRALTQFELELSAKVLAYVQDTVRGRIDPNKLSGYHDFKRKDVNLAPVL
KLARMSPDTAAYLRSRTPDGPQFVALEDELAKLRAEGASDDRIDIALSGLLRPGDNSSEI
PNIVKAIDKRGSAALKGEHAATLAAYTGSTDYSPEIVALVEGFQQEHGLKPDGVIGQATV
RAMTGGDSNASKVDKLIVAMEQARWLPADLGSRYVFINQPAYMVYYHNDNKEQLSMRVVV
GQPSHQTFFFQDQIETVEFNPFWGVPQSIIINEMLPRLRSDPSYLDRMGYEVTVGGRAVA
SSSVDWYGSTTNVSVRQPPSDDNALGELKILFPNAHAIYMHDTPSKSFFKRDMRALSHGC
VRLAEPRAMAAAVLNTSVDQIGKEIATGKNHALQVPQKIPVYVAYFTAWPNKDGVVQYFD
DVYGRDAYVQKAFEATTKARDAQI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgacattccttctgagaggtgcggtttccgcactcgcgctttcctgcggtatagctgcg
atgggtgtcgcgcccgcgcatgcctacacgttgatggatatgatccgcggggatcgcgcg
cggacgcagagcacgattgtcaatccgaggtcatcggttccttcgttccttcagtcggct
ccggacgcgccgctgccgaaggtgtcaagcccgcgctactatacctaccagcccgatgcg
atgcgcttcgtcgataccggcaagttcaccgatcctgttgtcacaggagcagtcgccgac
gcgtcggcggtgaccgagacgatgccgtcggttcagcgccgcttcctcatcgaggcaaag
gtgcgcgcacccgtcgacgtcgccaaggcgctagaggcctattatggtgacgtgaagaac
ccgctggtttggctcaccggaacggatgtgaatgatcgcgccaaggccgcgatggccgta
ttggcagacgcggcgtcggttggtctcgacgcggccgactatgcggtcccggtgccgacc
gaggatccgaccaatccggatccagcgatccgcgaccgcgccctgacgcagttcgagctg
gagctttctgccaaggtgctcgcctatgtgcaggataccgtgcgcggacgcatcgatccg
aacaagctctccggctatcatgatttcaagcgtaaggatgtgaacctcgcgccggtgctg
aagctcgcccgcatgagcccggatacggcagcctatctcagaagccggacgcccgatggg
ccgcagtttgttgcgctcgaggatgagttggcgaagctgcgcgccgaaggcgcaagcgac
gaccgcatcgatattgccctgagcggcctgcttcgtccgggcgataactcttccgaaatc
ccgaatatcgtgaaggcgatcgacaagcgcggttcggccgccctcaagggcgaacatgca
gcgacgctcgccgcatatacaggtagcaccgactattcgccggagatcgttgcactcgtc
gaaggtttccaacaggaacatggcctgaagccggacggtgtcatcggccaggccacggtc
cgcgccatgaccggcggcgacagcaacgcttcgaaggtcgataagttgatcgttgccatg
gagcaagcgcgctggctgccggctgacctcggctcgcgttacgttttcatcaaccagcca
gcctacatggtctattaccacaacgacaacaaggaacagttgtcgatgcgtgtcgtcgtc
ggtcagccgtcgcaccagaccttcttcttccaggaccagatcgagacggtcgagttcaac
ccgttctggggcgtgccgcagtcgatcatcatcaacgagatgttgccgcgcctgcgctcc
gacccaagctatttggatcggatgggctatgaagtaacggttggcggccgcgccgtggcg
tcgtccagcgtcgactggtacgggtctacgaccaacgtctcggtgcgccagccgccgagc
gacgacaacgcccttggcgaactcaagatcctgttcccgaacgcgcatgcgatctacatg
catgacacgccctcgaagagcttcttcaagcgcgacatgcgtgccctcagccatggttgc
gtgcgccttgctgagccgcgtgcgatggcggcagccgtcttgaacacttcggtggaccag
atcggcaaggaaatcgccacaggcaagaaccacgccttgcaggttccgcagaagataccg
gtttacgtagcttacttcacggcctggccgaacaaggatggcgtcgtgcagtatttcgac
gacgtatatggccgcgacgcctatgtgcagaaggccttcgaggccacgacgaaggcacgc
gacgcgcagatctga
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