Rhizobium favelukesii: LPU83_3883
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Entry
LPU83_3883 CDS
T03046
Name
(GenBank) putative conserved protein
KO
K09800
translocation and assembly module TamB
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhl02000
]
LPU83_3883
Transporters [BR:
rhl02000
]
Other transporters
Pores ion channels [TC:
1
]
LPU83_3883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF4097
Motif
Other DBs
NCBI-ProteinID:
CDM59519
UniProt:
W6RF95
LinkDB
All DBs
Position
3851862..3857981
Genome browser
AA seq
2039 aa
AA seq
DB search
MSATMQTLAKILNWIVRLLGFSIGALLVLLAIAIGVFGFTSFGARIVTDRVASSLSNRDM
TIKVQDPEGLLTGGLRASQIVLSDTKGVFAQVDGLAISWNPLALFTGRFHARSVEAAAIH
VLRQPVRTLPSRPAAAGEADSGFSLPLKIDIDKIALPEINLAQPLIGRAFSLAADGSVRA
DNEGGNASINVHRHDAPDAKLIADVAFMPDRNQLRLKAKLTEPKGGLLAGVLALPGNPAV
EISLTGDGPISDWRGQLQAALDGQQRASIEAHHTLTPESLHHLDLKGGGDLNSLLPAAFR
PLFAGQTNIDVAANFDNKGKIDIQTGNLATGAVVIAASGTLDPKGKNSLNANLLGTSGPV
DFRWPLAEGEVRFLISGVNLSLTGDAKASRLNASASLDSAVLPQATMGNVKLTAKSDNFN
LSGRSGSVQITLAAGDTSFVNPDINRAIQGPVTITLPLQISPDALGFNGATIESAAANAS
LNGSYKLSASSLTGNVKLTVQPAALPPAVATRFNSPIVIESQVAGTVPSKFNMSNLSIKS
NALEATGGVLLDEDTLDANLSGRVPNVQALLESATGELTYQLSAKGNVSALAVAADIKGP
SLVMAGRPVRQLEVNLSATADPKAPRAEITAKGTIDDHPINVSTAVQVVDGKVQLPSIAG
DVGNNRLTGHVELSAAFQPTGEVTFDFPDLGLLAALGGQKAEGDLNGSIDIANDNGKIAL
KVVASGSGLKRDTFAVVRPDINVAVTDLQAFAATGTIKADELASGPNKAQGLALSFTQQQ
NRTNFDLSATYDANPLVASGNVEVNAGTTLLRLDRLLAKPRSILVELASPSEVSISGGTV
TLSAVELKAGDGSVHVSGSAGETLDIKADIRNLPASLANSFVPKLDAAGTISGKVAVTGT
PAAPIANFDLDWKDAATSQTKGAGLSPLAIDANGKFADNTLDFEANASGKGGVSLKAGGS
VVTGPTAQSLNVDANIVNIPAGLANAFVPDLDAEGSISGNVTAAGKLPAPALDFKLNWKN
AATSQTRSAKLSSLGVTVNGNLKDNILSFDANARASGGMSLKAAGNYVVTGADAQTLKLD
GQLANIPAALANSFVPNLTAEGVISGTVSASGKLPRPTATFDLTWKDAATSHTKAARLSG
ISLTAKGSFADEKLTVQSDLAANGGVALNVSGNVSLAGTKIENLTADATIHNVPASLANA
FVPNLGASGTIAGTASASGTLQQPTVSFDLTWTDLATTQTKAARLSALALGAKGTFANNT
LDFETNLDGDGGSALKAKGKVTVEGTVVKGLQADATLSNLPAALVNNFMPDLGAEGTISG
TATASGSLPVPAVDFKLDWNNAGTRQTKAAGLSNLRLNAAGKLADNKISFDATLNSSRNT
LLKAKGTANLQGASVQGLSVDADISDLPASLANGFVPNLGAEGTISGTAKTSGTPTNPII
DFKLDWKDAATKQTRASGIRPLSANASGKLADGRLDFTTNLSGSGVSMKAGGNFVIAGQN
AQSLAVDADISSLPAGLANAFVPGLAAEGNISGSVKASGKLPLPAVDFNLDWRGAATSQT
RSAGLSPLTIAANGRLKDDRLTIDTNLAGDSGLSLRGGGSVTVTGNRALDMRFSGNLPFS
VLGTQLAAQGFVADGTANLNLQISGTAAAPSVNGTVTTSGARVVDVRRNLAINNLTADIR
FTGNEAVISRLTGQLASGGSVSASGSVGIQPASNFPANIDVKLDRAVYVDGTLVVATVDG
TLGLRGPLLANPTLNGRLRLERASITVPERLPTSLREIDIRHVNAPKAVLSQLRDETQQG
ARAKSNTINLDLQLDAPSQIFVRGRGIDAELGGSVTIRGTAAEPIVSGGFTMRRGRLTIL
NRRLDFTNRSRITFAGDLTPALEMEASSTSGSTTLTVDVTGLATDPSITFSSSPALPQDE
VLAQLIFGQSMSRLSPVQIAQLADAISQLAGGRSGSLFQGLRNQLGVDDFDISTDAKGRT
NVSVGRYLNDRTYFELQQTTGKGGAKAIINLDVGRGVKLRAGAGGDGAGEAGIVYEHEY
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaccatgcagacactggcgaaaatcttgaactggatcgtgcggctgctcggt
ttttccatcggcgccctcctggtcctgcttgccatcgccatcggtgtcttcggcttcacg
tctttcggcgcacgcatcgtcaccgacagggtcgcctcgagcctctcaaaccgggatatg
accatcaaggttcaggaccccgaggggctgctgactggcggactacgcgccagccagatc
gtgctctccgacaccaagggcgtcttcgcacaggtcgacggccttgccataagttggaat
cccctagcgctcttcaccggcaggttccacgccagaagcgtcgaagctgcggcaatccac
gtccttcggcaaccggtgcgcacgctcccgtcgcgtccggccgcagcaggcgaagccgac
agcggcttttcactgccgctcaagatcgacatcgacaagatcgccttgccggaaatcaac
cttgcccagcctctgatcgggcgggccttctcgcttgcagcggacggcagcgtgcgcgcc
gacaacgaaggtgggaacgcatcgatcaacgtccaccgtcacgatgctccggatgcaaag
ctgatcgccgatgtcgctttcatgccggatcgcaatcagttgcgactgaaggcaaaactg
acggaaccgaagggcggactgctcgcaggtgtcctggcgctgcccggcaacccggctgtg
gaaatcagcctgacgggtgacggaccgatctcggactggcgaggccagttgcaggccgct
ctcgacggacagcaacgcgcctcgatcgaggcgcaccacaccctgacacctgagagcctt
caccaccttgacctcaagggcggcggcgaccttaactcactgttgccggctgccttccgc
ccgctctttgcggggcagacgaacatcgacgtcgccgcgaacttcgataacaagggcaag
atcgacatccagaccggcaatctggcaaccggcgccgttgttatcgccgcatcaggcacc
ttggatccgaagggcaaaaacagcctgaacgccaatcttttgggaacgtcgggaccggtt
gatttccgttggccgctggccgagggtgaagtccgcttcctgatctccggcgtcaatctt
tcgttgaccggcgatgccaaggcctctcgcctcaacgccagcgcctcgctcgattccgcc
gtgctgccgcaggcgacgatgggcaacgtgaagctgacagcaaagagcgacaacttcaac
ctctccggccgctcgggaagcgttcagattacgctcgccgcaggtgacacatcgttcgtc
aatcccgacatcaaccgggcaatccaaggccccgtcacgatcacgctgccgctgcagatc
tcgccggatgcgcttggcttcaatggcgccacaatcgaaagcgccgctgccaacgcaagc
ctcaacggttcctataaattgagtgccagttcgttgaccggtaacgtcaagctgaccgtc
caaccggcggcgctgccgcctgcggtcgcaacgcgtttcaattcgccgatcgtgatcgag
agtcaggttgcgggaacggttccctcgaaattcaacatgtcgaatctctccatcaaatcc
aacgctctggaggccacaggaggagtgctgctcgatgaggacacgctcgatgccaatctc
tccggtcgcgtcccaaatgttcaggcgctgcttgaaagcgcgacaggcgagctaacctac
cagctgagcgcaaaaggcaatgtctcggctcttgcggtggcggctgatatcaagggcccg
tcactcgtgatggccggccggccggtcaggcaactcgaggtcaacctttccgcaacagcg
gacccgaaggcgccacgggccgaaatcacggccaagggcacgatcgatgaccatccaatc
aatgtcagcactgctgttcaggtcgtggatggaaaagtgcagcttccatcgatcgctggc
gacgtcggcaacaaccgcctgacgggccacgtcgaactgtcggcggctttccagccgacc
ggagaggtgacctttgatttccccgatctcggccttcttgcggcgctcggtggacagaag
gcggagggcgacctcaacggttcgatcgatattgccaacgacaacggcaagatcgccctt
aaggtcgtcgcatctggcagcggcctgaagcgcgatacgtttgccgtggtcagaccagac
atcaacgtcgcggtcaccgacctccaggcttttgccgcgaccggcacgatcaaggcggac
gagcttgcttccgggccaaacaaggcgcaaggcctggcgctgagtttcacgcagcaacag
aaccggacgaacttcgatctcagcgccacctatgatgccaatcccttggtcgcgtcaggc
aatgtcgaggtgaatgccggcacgacgctgcttcgcctcgaccgcttgttggcgaagccg
cgcagcatcctcgtagaacttgcgtcgccgtcggaggtatcgatcagtggcggcaccgtg
acgctgagcgccgtggaactgaaggccggcgacggctcggttcacgtcagcggttcggcc
ggcgaaactcttgatatcaaggccgacatacgcaatctgcccgcaagccttgccaatagt
ttcgtcccaaagctcgatgccgccggcacgatctccggcaaggtcgccgtgaccggcaca
ccggcagcgccgattgccaactttgacctggattggaaggacgcggccaccagtcagaca
aagggcgccggcctttcgccactggcgatcgatgcaaacgggaaattcgccgacaacacg
ctcgactttgaagccaacgccagcggcaagggcggcgtatcgctgaaggccggtggcagt
gtcgtgaccggcccgactgcccagtcgctgaacgtcgacgccaatatcgtcaacatcccg
gccggattggcgaacgcatttgttccggatcttgatgccgaaggttcgatctcgggcaat
gtcacagccgccggaaagctgccggcgcctgcgctcgacttcaaactgaattggaagaac
gccgcaacaagccagaccagaagtgccaagctctcatcgcttggtgtaacggtgaacggc
aacctcaaagacaatattctcagcttcgatgccaacgcgcgcgctagtggcggcatgtcg
ctaaaagccgctggcaactacgtcgtgacaggcgccgacgcccagacgctgaagctggat
gggcagctcgccaacattccggctgctcttgccaacagcttcgtcccgaatctcaccgcc
gagggcgtgatatcgggaaccgtatcggcttccggcaaattgccgaggcccaccgcaacc
ttcgatcttacgtggaaggatgcagcaaccagccacaccaaggcggcccgcctttccggg
atcagcttgacggcaaagggcagcttcgcagatgaaaagttgaccgtccagagcgacctt
gcggcgaacggcggcgtggcactgaacgtctccggcaacgtctcgctggcgggaacgaaa
atcgagaacctcacggcagatgcgacgatacacaacgttcccgcgagcctggcaaacgcc
ttcgttccaaacctcggcgccagcggcacgatcgccggcacggcctccgcttccggaacg
ctgcaacagccgacggtaagcttcgacctcacctggacggacctcgcaaccacgcagacg
aaggcggcacgcctctctgccctcgcactcggtgcaaagggcacattcgccaacaacaca
ctggacttcgagaccaatctcgacggcgatggcggctccgccctgaaggcgaagggaaag
gttacggttgaaggaacggtcgtgaagggcctgcaggcggatgcgacgctgagcaacctt
cccgccgcgttggtcaacaatttcatgccggatctcggtgccgaaggaacgatctcgggg
acggcgaccgcgtccggctcgctcccggttcctgctgtcgacttcaagctcgactggaac
aatgccggaacccgtcagaccaaggctgccggcctttcgaacctccggctgaacgcggcc
ggcaaactcgccgacaacaagatctcgtttgacgcgacgctgaacagcagtcgcaatacg
ctgctgaaggcaaagggaacggccaatctgcaaggcgccagcgtccaaggtctctcggtc
gacgccgacatttcggatctgcctgcaagcctcgccaatggcttcgtcccgaacctcggc
gccgaaggaacgatatcaggcacggcgaagacgtcagggacgccgaccaatccgatcatc
gattttaagctcgactggaaagacgccgcaacgaagcagacgagggcatccggcatccgg
ccgctttcggcaaacgcgagcgggaagcttgcggacggcaggctcgactttacaacgaat
ttgagcggtagcggcgtgtcgatgaaggccggtggcaacttcgtcatcgctgggcagaat
gcccaatcgctcgcggtcgatgccgacatctccagcctgcctgccggccttgccaacgcg
ttcgtgcctggactggccgccgagggcaacatttcgggctcggtcaaggcatcaggcaag
ctgcctttgcccgcggtcgacttcaatcttgactggaggggtgccgccaccagccagacc
agaagcgccgggctttcgcccttaaccatcgccgcaaacggaagactgaaagacgatcgc
ttgacgatcgacaccaatctggccggcgatagcggcctctccctgagaggcggcggcagc
gtcacagtcacaggcaatcgcgcgctggacatgcgcttttccggcaatctgccattttcc
gtgctcggcacgcagcttgccgcccagggcttcgtcgccgacggcacggccaatctcaat
ctgcagatcagcggaaccgccgcggcaccgtccgtcaacggtacggtgacgaccagcggc
gcaagggtcgtcgatgtccgccgcaaccttgcgatcaacaatctgacggcagatatccgc
ttcaccggcaacgaggccgtgatctcgcgccttaccggtcaactcgccagcggcggcagc
gtctcggcgtccggtagcgtcgggatccagccggcttccaacttccctgccaacatcgac
gtcaagctcgacagggccgtctatgtcgatgggacgctcgtagtagcaaccgtcgacggg
acgctcggtttgcgtggtccgctgctcgcgaaccccaccctgaatggcaggctgcggctg
gagagagcatcgatcaccgtccccgagagactgccaacctcgctgcgagaaatcgacatc
aggcacgtcaacgccccgaaggcggttctctcgcagctccgagacgagacacaacagggc
gcgcgcgcgaaatccaacaccatcaatctcgatcttcaactggatgctccctcacagatc
ttcgtgcgtggtcgcggtatcgatgccgaactcggcggcagcgtcacgatcaggggaacg
gcggcagagccgatcgtttcgggcggcttcaccatgcggcgcggtcgcctgacgattttg
aaccggcgcctcgatttcaccaacagaagccgtatcacctttgccggcgatctcacgcct
gcccttgagatggaagccagctcgacctcgggctccacgacgctgaccgtcgatgtaacc
gggctggcaaccgatccctcgatcactttctcttcgtcacccgcactgccgcaagacgag
gttctggcgcaactgatcttcggacagtcgatgtcgaggctgtcgccggtccagatcgct
cagctcgccgatgccatcagtcagctggccggcggtcgttccgggtcactgttccagggc
ctgcgtaaccagcttggcgtagacgatttcgacatcagtaccgatgccaagggccgcacc
aacgtcagcgtcggccgctatctcaacgaccggacctatttcgaactgcagcagaccacc
ggcaagggcggcgcgaaggcgattatcaatctcgatgtcggccgcggtgtgaagctgcgc
gccggcgcgggcggcgacggcgccggggaagccggcatcgtttacgagcacgaatactag
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