Rhizobium favelukesii: LPU83_3924
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Entry
LPU83_3924 CDS
T03046
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase (ubiquinone) flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00020
Citrate cycle (TCA cycle)
rhl00190
Oxidative phosphorylation
rhl00650
Butanoate metabolism
rhl00720
Other carbon fixation pathways
rhl01100
Metabolic pathways
rhl01110
Biosynthesis of secondary metabolites
rhl01120
Microbial metabolism in diverse environments
rhl01200
Carbon metabolism
Module
rhl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhl_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LPU83_3924 (sdhA)
00650 Butanoate metabolism
LPU83_3924 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LPU83_3924 (sdhA)
00720 Other carbon fixation pathways
LPU83_3924 (sdhA)
Enzymes [BR:
rhl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LPU83_3924 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_oxidored
FAD_binding_3
HI0933_like
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
CDM59560
UniProt:
W6RGS9
LinkDB
All DBs
Position
complement(3899403..3901244)
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AA seq
613 aa
AA seq
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MASTSPAQNGKAYKYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVA
AQGGIAASLQNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYGVPFSR
NEEGKIYQRPFGGHMQNFGEGPPVQRTCAVADRTGHAILHTLYGQSLRNNAEFFIEYFAL
DLIMSEDGSRCTGVVAWCLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMV
ARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTLEIREGRGVGKAKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADSANPERIIPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGEVIDRAAPVPHLNVAACDKIMDRFDDLRHASGGTPTAVLREKMQRAM
QEDAAVFRTQESLESGCKRISAIWQEMRDIKVTDRSMIWNSDLVETLELQNLMANAITTI
YGAEARKESRGSHAREDYTEGAFAGRDDVNWRKHTLAWVNDAGDVKLDYRPVHTELIAEG
IDPKKIAPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacttcacccgctcagaatgggaaggcctacaagtatgtcgatcactcatac
gatgtgatcgtcgtcggcgccggtggcgccggccttcgcgccacgctcggcatggccgaa
cagggtttccgcacggcctgtatcaccaaggtgttcccgacccgctcgcacacggtcgca
gcccagggcgggatcgccgcctcgctgcagaacatgacgcccgacagctggcagtggcat
ctctacgacaccgtcaagggctccgactggctcggcgacgtcgacgccatgcagtatctc
accatggaagcgccgaaggcggtctatgagctggagcactacggcgttcccttctcgcgc
aatgaggaaggcaagatctatcagcggccgttcggcggccacatgcagaacttcggcgaa
ggcccgccggtacagcgcacctgtgccgttgccgaccgtaccggccacgccatcctgcac
acgctctacggccagtcgctgcgcaacaacgcggaattcttcatcgagtatttcgcgctc
gacctgatcatgtcggaagacggcagccgctgcaccggcgtcgtcgcctggtgcctcgat
gacggcacgatccatcgcttcgccgccaagatggtggtgctggcgaccggcggttacggc
cgcgcctatttctcggcaacgtctgcccatacctgcaccggcgacggcggcggcatggtg
gcccgcgccggcttgcccctgcaggacatggagttcgtgcagttccacccgaccggcatc
tacggttcgggctgtctcatcaccgaaggcgcgcgcggcgaaggcggctacctcgtgaat
tccgaaggtgaacgcttcatggaacgctatgcgccttcggccaaggaccttgcctcgcgc
gacgtcgtctcgcgctgcatgaccttggagattcgtgaaggccgcggtgtcggcaaggcc
aaggaccatatcttcctgcatctcgaccatctcgatccggccgttctgcacgagcgcctg
ccggggatttccgagagcgccaagatcttcgccggtgtcgacgtcacccgcgagccgatc
ccggtcctgccgacggtccattacaacatgggcggtattccgaccaactactggggcgaa
gtgctgaacgccgacagcgccaatccggaacgcatcatccccggcctgatggctgtcggc
gaagccggctgcgcctcggtgcatggcgccaaccgtctcggttcgaattcgctgatcgac
ctcgtggtcttcggccgcgccgcggcaatccgcgccggcgaggtgatagaccgtgccgca
ccggtgccgcatctgaatgtcgccgcttgcgacaagatcatggatcgctttgacgatctt
cgccatgccagcggcggcacgccgacggccgtgctgcgcgagaagatgcaacgcgccatg
caggaagacgctgccgtgttccgcacgcaggaatcgctggaatcgggctgcaaacgcatc
tcggccatctggcaggaaatgcgtgatatcaaggtcaccgaccgctcgatgatctggaac
tccgacctcgtggaaacgctcgagctacagaacctgatggccaacgccatcaccacgatc
tatggcgccgaggcccgcaaggaaagccgcggctcccacgcacgcgaagactacacggaa
ggcgcattcgccgggcgcgacgacgtcaactggcgcaagcacacgctcgcctgggtcaac
gacgccggcgacgtcaagctcgactaccgcccggttcacaccgagctcatcgcagagggc
atcgatcccaagaagatcgcgcccaaggctcgcgtgtactaa
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