Rhizobium favelukesii: LPU83_3981
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Entry
LPU83_3981 CDS
T03046
Name
(GenBank) putative conserved protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhl03016
]
LPU83_3981
Enzymes [BR:
rhl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
LPU83_3981
Transfer RNA biogenesis [BR:
rhl03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
LPU83_3981
Prokaryotic type
Methylthiotransferases
LPU83_3981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CDM59617
UniProt:
W6REA5
LinkDB
All DBs
Position
complement(3952058..3953332)
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AA seq
424 aa
AA seq
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MSGVEVITFGCRLNTYESEVMRAEAEKAGLNNAILVNTCAVTGEAVRQARQAIRRARRDN
PHARIIVTGCAAQTEKETFAGMAEVDVVLGNEEKLKSASYRTLPDFGVSAEEKLRVNDIM
SVRQTAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPMGAVVDQARKLVE
SGYREIVLTGVDATSYGVDLPGEPTLGLLAKTLLKQVPDIRRLRLSSIDSIEADRHLLDL
IADDARFMPHLHLSLQHGDDMILKRMKRRHSSADALAFINDVRGVRPDMSFGADMIAGFP
TESEEMFANAVRLAEEANIAHLHVFPYSPRPGTPAARMPQLDRALVKERAARLRTTGHRL
HQSHLDGMVGTRQWLLVENNGLAHTENFTLVAAAGLAPRSFVQAAITGHNGKHLDMQLTA
ADAA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcgtcgaggtcattaccttcggctgtcgtctgaacacctacgaatccgaagtg
atgcgggcggaggccgagaaggccgggctcaacaatgccatcctcgtgaatacttgtgcg
gtcaccggcgaggctgtgcgccaggctcgccaggcgatccgacgcgcacggcgcgacaac
ccgcatgcccgcattatcgttaccggatgtgcggcgcagacggaaaaagagaccttcgct
ggcatggccgaggtcgatgtcgttctcgggaacgaagagaaactgaaaagcgcctcctat
cgcacgcttccggatttcggcgtttcagcggaagagaagttgcgcgtcaacgatatcatg
agcgtgcgccagacggcgccgcagatggtcaagcacatcgatggtcatgtgcgggctttc
atccaggtccagaacggctgcgaccaccgctgcacgttctgtatcattccctatggccgt
ggcaattcgcgttccgtgccgatgggggcagtcgtcgaccaggcgcgcaagctcgtcgaa
agcggctaccgagagatcgtgctgaccggggtcgacgcaaccagctacggggtcgatctg
cctggggagccgacgctcggactgcttgccaagacgcttctgaaacaggtgccggatatt
cgccgcctgcggctttcatcgatcgacagcattgaggcggacaggcatctgctggatctt
atcgccgacgatgcgcgcttcatgccgcatctccacctttcgctgcaacatggcgacgac
atgatcctgaagcggatgaagcgccgccattctagcgcggatgccttggcctttatcaac
gacgtgcgcggcgtgcgaccggacatgagcttcggcgccgatatgatagccggctttccg
actgagagcgaagagatgttcgccaatgccgtgcggctggcggaagaggccaatatcgcc
catctccatgtctttccctatagcccgcggccagggacgcctgccgcgcgaatgccacag
ctcgatcgcgcgctggtcaaggagcgggctgcacggcttcgcaccactggacatcgcctg
catcagtcccatctcgacggaatggtgggaacgcggcaatggctgctggtggaaaacaac
ggtttggcgcacaccgaaaacttcacgcttgtcgccgcagcggggcttgcgcctcgaagc
ttcgtgcaggcggcaattacgggccacaacggcaagcacctcgacatgcaattgacggcc
gccgacgcggcctga
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