Rhizobium favelukesii: LPU83_4032
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Entry
LPU83_4032 CDS
T03046
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00730
Thiamine metabolism
rhl01100
Metabolic pathways
rhl01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LPU83_4032 (thiC)
Enzymes [BR:
rhl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LPU83_4032 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CDM59667
UniProt:
W6REF2
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Position
4003158..4004984
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AA seq
608 aa
AA seq
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MNIAAKNITPTVTTGPLPASRKIYIPGEIHPDVRVPMREISVHPTSGEPPVTVYDSSGIY
TVEGADIRIEQGLPELRRGWVVARGDVEAYQGRRVRPEDNGFASGERLTPEFPGKRQPFR
ARDGKAVTQLAYARAGIITPEMEFIAIRENLGRKAQAEAITRDGESFGARIPDHVTPEFV
RQEIAAGRAIIPANINHPESEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAARWG
ADTVMDLSTGRNIHNIREWIIRNSPLPIGTVPLYQALEKVEGIAENLTWEVYRDTLIEQA
EQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHRESFLYEHFEEICDIC
RAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWAKDCQVMIEGPGHVPMHKI
KENMDKQLAVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWEDQFNLALDPETAR
SFHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLDAMAAKYREGGDLYMPI
EAVEQSGD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgccgcaaagaatatcaccccgaccgttacgacaggcccattgccggcctct
cgaaaaatctacattcccggagaaatccaccctgatgtccgcgtcccgatgcgcgagatc
agcgttcacccgacatcgggcgaaccgccggtcacggtctatgattcctcgggcatctat
accgtcgaaggtgccgacatccgcatcgagcagggacttccagaactgcgccgcggctgg
gtggtcgcccgcggtgacgtcgaagcctatcagggccgccgggtccgccccgaagacaac
ggctttgccagcggcgaacggctgacaccggaatttcccggcaagcgccagccgttccgc
gcaagggacggcaaggccgtgacccagctcgcctatgcgcgcgccggcattatcacgccg
gagatggaattcatcgcgatccgcgagaaccttggccgcaaggcgcaggcggaggctatc
acgcgcgacggcgaaagcttcggcgcccggattccggatcacgtaaccccggaattcgtc
cggcaggagattgccgccggccgcgcgatcatccccgccaacatcaatcatcccgaatcc
gaaccgatgatcatcggccggaacttcctggtgaagatcaacgccaatatcggcaactcc
gccgtcacgtcttccatggccgaagaggtcgagaagatggtctgggctgcccgctggggc
gccgacacagtcatggatctctccaccggccgtaacatccacaacatccgcgaatggatc
atccgcaactcgccactgccgatcggtaccgttccactctatcaggcgcttgagaaggtc
gagggcattgccgagaacctgacctgggaagtctatcgcgacaccctgatcgagcaggcc
gagcagggggtcgactacttcaccattcacgccggcgtgcggctgcactacattccgctc
accgtcaaccgcgtcaccggcatcgtctcgcgcggtggctcgatcatggccaagtggtgt
cttcatcaccaccgcgaaagtttcctctacgagcatttcgaggagatctgcgacatctgc
cgcgcctatgacgtctccttctcgctcggcgacggcctgcgtccgggctcgattgccgac
gccaacgacgcggcacagttcgcagagctggaaacgctcggcgaactgacgaagatcgct
tgggccaaggactgccaggtcatgatcgaaggacccggacacgtgccgatgcacaagatc
aaggagaacatggacaagcagctcgccgtctgcggcgaggcgcccttctatacgctggga
ccgctgaccaccgacatcgcacccggctacgaccacatcacctcgggcatcggtgctgcg
atgatcggctggttcggcacggcgatgctctgctacgtcaccccgaaggagcatcttggt
ctacccgaccgcaacgacgtgaagaccggcgtcatcacctacaagatcgctgcccacgcc
gccgatctcgccaaggggcacccggccgctcaattgcgcgacgacgccctgtcgcgcgcg
cgcttcgaattccgatgggaggaccagttcaacctcgcgctggaccccgaaaccgcccgc
agcttccacgacgagacgctgccgaaggaagcgcataaggtggcgcacttctgctccatg
tgcggcccgaagttctgctcgatgcggatctcgcacgacatccgtgccgaggcgcagaag
gaagggctcgacgcgatggcagcgaaataccgcgagggcggcgatctctacatgccaatc
gaagccgtcgaacaatcgggcgactga
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