Rhizobium favelukesii: LPU83_pLPU83c0253
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Entry
LPU83_pLPU83c0253 CDS
T03046
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPU83_pLPU83c0253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhl03019
]
LPU83_pLPU83c0253
03110 Chaperones and folding catalysts [BR:
rhl03110
]
LPU83_pLPU83c0253
03029 Mitochondrial biogenesis [BR:
rhl03029
]
LPU83_pLPU83c0253
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhl04147
]
LPU83_pLPU83c0253
Enzymes [BR:
rhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LPU83_pLPU83c0253
Messenger RNA biogenesis [BR:
rhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LPU83_pLPU83c0253
Chaperones and folding catalysts [BR:
rhl03110
]
Heat shock proteins
HSP60 / Chaperonin
LPU83_pLPU83c0253
Mitochondrial biogenesis [BR:
rhl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LPU83_pLPU83c0253
Exosome [BR:
rhl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LPU83_pLPU83c0253
Exosomal proteins of other body fluids (saliva and urine)
LPU83_pLPU83c0253
Exosomal proteins of breast cancer cells
LPU83_pLPU83c0253
Exosomal proteins of colorectal cancer cells
LPU83_pLPU83c0253
Exosomal proteins of bladder cancer cells
LPU83_pLPU83c0253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
LinkDB
All DBs
Position
pLPU83c:239078..240730
Genome browser
AA seq
550 aa
AA seq
DB search
MSPKERPRAASSFPTPPRKSRRNAKSSPSADAVKVTLGPKGRNVILDKSFGAPRITKDGV
TVAKEIELEDKFENMGAQMVREVASKTHDIAGDGTTTATVLAQAIVREGGKAVAAGMNPM
DLKRGIDLAVAEVVKDLQAKAKKINTSGEIAQVGTISANGEKEIGAYIADAMQKVGNEGV
ITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNAEKMVAELEDAYVLLHEKKVSNLQPML
PVLEAVVQSGNPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAI
LTGGTVISEDLGIKLESVTLDMLGRSKKVSITKENTTIVDGAGAKSDIEGRVAQIKAQIE
ETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRIDDALNATRAAVEEGIVPG
GGVALLRSSTKITSKGENQDQEAGVNIVRRALQSLVRQIAENAGDEASIVVGKILEKNED
NYGYNAQTSEYGDMIAMGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKESAGGGM
PDMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgagtccgaaggaaagaccaagggcggcatcatcattcccgacaccgccaaggaaaagc
cgcaggaatgcgaaatcgtcgccgtcggctgacgcagtgaaggtaacactcggcccgaag
ggtcgtaacgtcatcctcgacaagtccttcggcgctccgcgcatcaccaaggatggcgtc
accgtcgccaaggaaatcgaactggaagacaagttcgagaacatgggcgcccaaatggtc
cgcgaagtagcttcgaagacccacgacatcgccggcgacggcaccacgactgcaacggtt
ctcgcccaggcgatcgttcgcgaaggcggcaaggcggtcgcagctggcatgaacccgatg
gacctgaagcgcggcatcgatctcgccgttgctgaagtcgtcaaggatctccaggccaag
gccaagaagatcaacacgtctggagagattgcccaggtcggcacgatctcggcaaacggc
gaaaaggaaattggcgcttatatcgccgacgccatgcagaaggtcggcaacgaaggcgtc
atcaccgttgaagaagccaagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcag
ttcgaccgcggctacctcagcccctacttcgtgacaaatgccgagaagatggtggccgag
ctggaagatgcttacgtgctgctgcacgaaaagaaggtctcgaacctgcagccaatgctt
ccggttctcgaagctgtcgttcagagcggcaatccactcctcatcatcgctgaagacgtc
gaaggcgaagcgcttgcgaccctcgtcgtcaacaagctgcgcggcggcctgaagattgct
gccgtcaaggctccgggcttcggcgaccgccgcaaggccatgctcgaagacatcgcgatc
ctgaccggtggtacggtcatctccgaagacctcggcatcaagctcgaatccgtaacgctc
gacatgctcggccgttcgaagaaggtttcgatcaccaaggaaaatacgacgatcgtcgac
ggcgctggcgccaagtccgacatcgaaggccgcgttgcacagatcaaggctcagatcgaa
gaaaccacttcggactatgaccgcgaaaagctgcaggaacgccttgccaagctggctggc
ggcgttgccgtcattcgcgtcggcggttcgacggaagtcgaagtgaaggaaaggaaggac
cgcatcgacgacgcgctcaatgcgacgcgcgctgccgttgaggaaggcatcgtaccgggc
ggcggcgtcgctctgctacgttcgtccacgaagatcacctccaagggtgaaaatcaggat
caggaagccggcgtgaacatcgtccgcagggcgctgcagtcgctggtgcgccagatcgct
gaaaacgcaggcgacgaagcctcgatcgttgtcggcaagatcctcgaaaagaacgaagac
aactatggctacaacgcccagacgtccgagtatggcgacatgatcgccatgggcatcgtc
gacccggtcaaggttgtgcgcacggctctgcagaacgcagcttcggttgcttcgctgctg
atcaccaccgaagccatgatcgctgaactgcccaagaaggaatccgctggcggcggcatg
cctgacatgggtggtatgggtggcatgatgtga
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