Rhizobium favelukesii: LPU83_pLPU83c0355
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Entry
LPU83_pLPU83c0355 CDS
T03046
Symbol
soxR
Name
(GenBank) Redox-sensitive transcriptional activator soxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhl03000
]
LPU83_pLPU83c0355 (soxR)
Transcription factors [BR:
rhl03000
]
Prokaryotic type
Helix-turn-helix
MerR family
LPU83_pLPU83c0355 (soxR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
4HB_RdRP3_N
Motif
LinkDB
All DBs
Position
pLPU83c:complement(331834..332268)
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AA seq
144 aa
AA seq
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MDPMLTITDVSRRSGVASSALRFYEERGLIPSERAGSGHRRYHRSVLRRIAFIVFAQRIG
LRLEEIGAELAKLPVDRVPSRRDWSRLSGEWAMRIDQRIAELQRLRSGLTECIGCGCLSI
DRCSLANPADVAGRKGPGPRYWLG
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatgctaaccatcaccgacgtgtcgcggcgcagcggcgtagcctcgtcggca
ctgcgtttctacgaggagcgcgggttgatcccgtccgagcgggccggctcggggcacagg
cgttatcaccgatccgtactgcgccggatcgccttcatcgtctttgcgcaacgcattggg
ttgaggcttgaggagatcggcgccgagctcgccaagttgccggtcgaccgcgtgccgtcg
cgtcgggattggtcacggctgtcgggcgagtgggcaatgcgcatcgaccagcgcatagcc
gagttgcagcgcctgcggtccgggcttaccgaatgcatcggctgcggctgcctgtcgatc
gaccggtgtagcctggcgaatcctgctgatgtggcaggacgcaaggggccggggccgagg
tattggctggggtga
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