Rhizobium favelukesii: LPU83_pLPU83c0363
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Entry
LPU83_pLPU83c0363 CDS
T03046
Name
(GenBank) Inner membrane ABC transporter permease protein ydcV
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
rhl
Rhizobium favelukesii
Pathway
rhl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPU83_pLPU83c0363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhl02000
]
LPU83_pLPU83c0363
Transporters [BR:
rhl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LPU83_pLPU83c0363
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
BIV_Env
TM_ErbB1
Motif
LinkDB
All DBs
Position
pLPU83c:complement(337312..338133)
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AA seq
273 aa
AA seq
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MNHEKRTFEFYVLAAFFLVFVLFLYGPLSAILILSFQGPDGGLTFPLNGVSVHWFFNLFE
KQAVGDFGASFRRSFTLGLMVMVVTVVVSLLAGLAFRRRFRGSTVLFYATVASLVVPSII
ISLGIGVVFQQSGLKPAWYSSAFGAHLTWTLPFGVLIMFAVFNRFSPAYEEAARDLGATS
WQTFRHVVLPMIAPSLIGVGLFGFTLSYDEFARTLMTSGSYNTLPLEIYGMTTNVTTPVL
YALGTVTTLFSFTIILVALGIMLMLRRRQAKTS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgagaagcgcaccttcgaattctatgtgcttgcggcgttctttctcgtcttc
gtgctgttcctgtacggaccgctgtcggcgatcctgatcctgtccttccaggggccggat
ggcggcctgacgttcccgctgaatggtgtatccgttcattggtttttcaatctgttcgag
aagcaggcggtcggcgacttcggcgcctctttccgtcgctccttcacgctcgggctgatg
gtgatggtggtaaccgttgtcgtttcgctgctggcgggcctggcgttccggcgccgcttc
cgcggttcgaccgtgcttttttatgcgacggtcgcaagcctcgtcgttccatcgatcatc
atttcgctcgggatcggcgtggtgttccagcaaagcggcctgaagccagcctggtattca
tccgctttcggcgcgcatctgacatggacgctgccgttcggcgtgctgatcatgtttgcc
gtcttcaaccgcttctcgcccgcctatgaagaggcggcgcgcgatctcggcgcgacctcc
tggcagacgttcaggcatgtcgtgctgccgatgattgcgccaagcctgatcggcgttggc
cttttcggcttcacactttcctatgacgaattcgctcggacgctgatgacatcgggcagc
tacaacacgctgccgctcgagatttacggcatgaccaccaacgtcacgacgccggtgctc
tacgcgctcggaacggtgacgacgctgttttccttcaccatcattctcgtcgcgctcggt
atcatgctcatgctgcgccggcgccaagcaaaaacaagttga
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