Rhizobium favelukesii: LPU83_pLPU83c0382
Help
Entry
LPU83_pLPU83c0382 CDS
T03046
Name
(GenBank) putative mscS family protein ybiO
KO
K22044
moderate conductance mechanosensitive channel
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhl02000
]
LPU83_pLPU83c0382
Transporters [BR:
rhl02000
]
Other transporters
Pores ion channels [TC:
1
]
LPU83_pLPU83c0382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
LinkDB
All DBs
Position
pLPU83c:complement(355544..357664)
Genome browser
AA seq
706 aa
AA seq
DB search
MVRTAAFMLVALMAVSTAAQSQPAPISQPESVQRFLAMFADPAVQTFLQQQAAAARATPE
PATQARDTHVSFSEVTTRLRTHTSAMLLAARSFPTETMRGAAVLERDVEANGGTRPIFLI
AAFVVAGLAAQWVFWRSSAGWRLWMSRAPIFTVRERLVAVGARLLWAVCYVLAFGLGSIG
FFLVFEWPPLVREIVVGYLFAVVVFRLASAVFDVILAPHRLAQNQFRLIPVSDEVAAHWA
RRLGYAVGWYAFGWVTIHLLGSLGFSVHARQLVAYSLGVVLLIIGIEAVWRRPSVFSQTP
RSGRIGIRARNCLWTAYFAAVWLLWVVGATKLFWIIVVCAALPGAIALTRAAVNNILHSA
DMEEESRKSTVASVIVERGIRAVLIIGAIVFLADMLNVELTRMTMQDSPALRLIRGVLSA
GIILMVVDLAWSVVKVLIDRRLGDTEAVLAIGSEQERRRTRLRTLLPILRNVLMILFAAI
AIMMALSSLGVEIGPLIAGAGVVGVAIGFGAQTVVKDVISGMFYLLDDAFRVGEYIQSGS
YKGNVESFSLRSIKLRHHRGAVYIVPFSELGAVQNLSRDWVIEKMTITVTYDADIDKARK
IIKKIGLELFEDPEFKPTTIEPLKMQGIDSLGDSGLLLRMKVMTQPGQQFTLKRRALRMI
HQAFNENGIKIAVPTVQVSGGKDDSVAAAAQQTLATHNAAIAAGST
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtacagcggctttcatgctggttgccctcatggctgtttcgacggccgcgcag
agccagccagctcccatctcgcagccggaaagcgttcaacggttcttagcgatgttcgcc
gatcccgccgtccagacttttctccagcagcaggctgccgcggcgcgggcgacgcccgaa
ccagccacgcaggccagggacacgcacgtttccttcagcgaggtcacaacacgccttcgc
acccataccagcgcgatgcttttagcggcacggtcatttcccacagagacgatgcgtggg
gcggccgtcctcgagcgcgacgtcgaagcgaacggcggtacgcgaccaatcttcctcatc
gccgcctttgtcgtcgcagggctcgccgcacaatgggtgttctggcgttcgagcgccgga
tggcgcctgtggatgtcgcgcgcgcccatcttcaccgtgagagagagactggtagccgtg
ggggcaagactgctttgggccgtctgctacgttctggccttcgggctgggcagcatcgga
tttttccttgtgttcgagtggccgccgctcgtccgcgagatcgtcgtcggctacctgttt
gccgtcgtcgtcttccgccttgcgagtgccgtcttcgacgtgatcctcgccccccatcgg
ctggcacaaaatcaatttcgccttatacccgtctcggacgaggtcgccgctcattgggca
aggcggctcggatatgctgtgggttggtatgccttcggctgggtgaccatccatctgctc
ggcagtcttggcttttccgttcacgcgcgccagctcgtggcctactcgcttggcgttgtc
ctcctcatcatcggcatcgaagccgtttggcgacgtccttctgtgttctctcaaactcca
cggtcgggtcgaattggcattcgtgcccggaactgcctctggaccgcctattttgccgca
gtctggctgctatgggtggtcggcgctacgaagctgttctggatcatcgtcgtgtgcgcc
gcgctgccgggagcgatcgccctcaccagggccgcggtaaacaacattctgcatagcgcg
gatatggaagaggaaagcagaaaaagcaccgtcgcatcggtgatcgtggagcgcggcata
cgcgccgtcctgatcatcggcgcgatcgtctttctcgcggatatgctcaacgtcgagcta
acacgaatgacgatgcaggactcccccgccctgcggctgatccgtggtgtgttgagcgcc
gggattattctcatggtcgtggatcttgcctggagcgtcgtgaaggtcctgatcgatcgc
agactcggcgacacggaagcggtcctcgcgattggtagcgagcaggaacggcgtcggacg
cgccttaggacattgctgcccatcctgcgcaatgtcctgatgatcctgttcgccgccatc
gcgatcatgatggcgttgtcgtcgctcggcgttgaaatcggaccgttgatcgcaggtgcc
ggcgtcgttggcgtcgccatcggcttcggggcgcagacggtcgtgaaggacgtcatcagc
ggaatgttctacctgctagacgatgcgttccgggttggagaatacatccagagcggcagt
tacaagggtaacgtcgagtcattcagcctgcggtccatcaagcttagacatcatcgcggt
gcagtctatatcgtccccttcagcgaactcggcgcggttcagaacctgagccgcgactgg
gtaatcgagaagatgacgattactgtgacctacgatgccgatatcgacaaggcgcgcaag
atcatcaagaagatcggtctggagctgttcgaggatccggaattcaagccgaccaccatt
gaaccgctgaagatgcagggcatcgacagtctgggcgactctggacttctgctgcgaatg
aaggtcatgacgcagcccggccagcagttcacgctgaagcggcgcgctctgcggatgatc
catcaggcattcaacgagaacggcatcaagatcgcggtgcccacggtgcaggtctcaggc
ggaaaggacgacagcgtcgccgccgcggcccagcagacgctcgcaacgcacaacgcagcg
atcgctgcgggatccacgtga
DBGET
integrated database retrieval system
