Rhizobium favelukesii: LPU83_pLPU83c0395
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Entry
LPU83_pLPU83c0395 CDS
T03046
Symbol
otrA
Name
(GenBank) Oxytetracycline resistance protein
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rhl01504
]
LPU83_pLPU83c0395 (otrA)
Antimicrobial resistance genes [BR:
rhl01504
]
Gene variants
Tetracycline resistance genes
Others
LPU83_pLPU83c0395 (otrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_IV
EFG_III
EFG_C
MMR_HSR1
EF-G_D2
RF3_C
FeoB_N
DUF5862
Motif
LinkDB
All DBs
Position
pLPU83c:complement(369505..371442)
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AA seq
645 aa
AA seq
DB search
MRTLNLGILAHVDAGKTSLTERLLFDTGTIDKLGSVDTGSTQTDSLELERQRGITIAAAV
VSFTLGDLVVNLIDTPGHPDFIAEVERILQLLDAAVVVVSAVEGVQAQTRVLVRALRRLG
VPFVFFINKIDRLGARYSEIVGDIASQLSVRPVAMSAVTNAGGRHAKVEGVDMMQEPHFS
AFCDALAVEDETLLSDFILAPESLTIERLRAALADQVAKCLLHPAFCGTAMTGIGITDLI
AAIETLLPGRNPDPLGPVEGKIFKIERGWGGEKLAYLNLTSGRVAMRDYLELPAGAAKVA
TMQVFSEGRLEKVNQVSAGQIAKIGGLANARIGNEVGAGRNTTVGFHFAPPTLETRVRPR
RPSDISALWLALQQLSEQDPLINLRINGDTSEMFVSLYGEVQKEIIQATLQNDFALDVAF
EESMTICAERLVGTGSGLEIIFKEPNPFLATIGLRVDPRPEDAGNSFALEVDVGQMPVSF
YRAVEETVFETLKAGIYGWQVIDCHVAMTAARHSSPSSTAADFRKLTPLVLATALSSAHT
VVCEPVDRFLLEVPAAALTATLTLLAQCGASPKGQLISGGIARLEGTITSAMVQTVQRQL
AGLSSGAGVLESSFDHYARKSGSTASRPRSGADPFDRADYLQRTR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacattaaatctgggcatcctcgcccatgtggatgcaggcaaaacgagccttacg
gaacgactcctttttgacaccggcacaatcgacaagctcggcagcgtcgataccggtagc
acgcagacagacagccttgaactcgagcgacagcgtggcatcacgattgcggccgctgtg
gtttccttcacgctcggcgacctcgttgtaaatctcatcgacacgcccggacatccggat
ttcatcgccgaggtcgagcggatacttcaattactcgatgctgccgtggttgttgtctcg
gcagtggagggcgttcaggcccagacgagagtcctggttcgggcgttgcggcgtctcggt
gttccgttcgttttcttcatcaataagatcgaccgcctcggggcgcgttattcagaaatc
gtaggggatatcgccagccaattgtcggttcgacccgtcgcaatgtcagccgtcacgaat
gccggtggccgacacgcgaaggtggagggtgtcgatatgatgcaggagcctcatttctct
gctttctgcgatgcccttgctgtcgaggacgaaactcttctcagtgatttcattttggcc
cccgaaagtctgactatcgagaggctcagagcagctcttgcggaccaggttgcgaagtgt
cttttgcatccggcattttgcggaaccgcgatgaccggcatcggtattacggacctgatt
gcagcgatcgaaaccctgctgccaggccgaaatcctgaccctctaggaccggtcgaagga
aaaatcttcaagatcgaacgcggatggggcggagaaaaactcgcatatctcaacctgacc
tctggtagggtcgcgatgcgcgactatctcgaactgccggccggcgcggccaaggtggca
accatgcaagtcttcagcgagggtcggctggagaaggtcaatcaggtcagtgctggacag
atcgccaagatcggcgggcttgccaatgcccgcattggcaatgaggtgggagccggtagg
aacacaaccgtcggctttcatttcgcgccacctactcttgagacccgcgttcgtccgcgg
cggccatctgacatttcagcactttggttggcgcttcagcaactctcagagcaagacccg
cttatcaatctgcgcataaatggcgacaccagcgagatgttcgtctcgctctacggcgag
gtgcaaaaggagattatccaggccacattgcaaaacgacttcgccctcgacgtcgcgttt
gaggaaagcatgactatctgcgccgaaaggcttgtcggcaccgggagcgggcttgagatt
atatttaaggagccaaacccatttcttgcgacgattgggttgcgtgtcgatccgcggccg
gaagatgcgggcaatagtttcgcgctggaagtggatgtcgggcaaatgccggtgagtttc
taccgagcggtcgaagaaaccgttttcgagacgctcaaagcgggcatctacggttggcag
gtaatcgattgccatgtggccatgacagccgcgcggcattcttccccttccagcaccgcc
gccgactttcgaaagctgacgccattggtactggcgaccgctctatcatctgcgcataca
gtcgtgtgcgagccggttgatcgtttccttctcgaggtaccggcggcagcattaactgcc
actctcacgctgcttgcacaatgtggcgcgtcccccaaaggacagctgatcagcggcggc
atagcccggttggagggaacgataacatccgcgatggttcagaccgttcaacgacagttg
gcgggactgtcgagcggcgcgggcgtgctggagagttcctttgatcactatgctcgaaaa
tctggctcaacggcttcgcggccacgttcgggtgccgacccgtttgatcgggctgactac
ctacagaggacgcgatga
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