Rhizobium favelukesii: LPU83_pLPU83c0479
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Entry
LPU83_pLPU83c0479 CDS
T03046
Name
(GenBank) alpha amylase catalytic region
KO
K16147
starch synthase (maltosyl-transferring) [EC:
2.4.99.16
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00500
Starch and sucrose metabolism
rhl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LPU83_pLPU83c0479
Enzymes [BR:
rhl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.16 starch synthase (maltosyl-transferring)
LPU83_pLPU83c0479
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgE_dom_N_S
Alpha-amylase
GLGE_C
hDGE_amylase
GHL6
Motif
LinkDB
All DBs
Position
pLPU83c:441907..445161
Genome browser
AA seq
1084 aa
AA seq
DB search
MDTRSQFDSRRSLLRLPPQIYYVHPLMLKGCDAWREVFAHAKDLGLDTVLTAPVFERGQN
ASVFVVRNFDRLDPELGLGESVEDGLTALVQAAREKDIKLMLDLVVDRAALDDKAAEPIP
ADPRVTPHESRSRRIDFISEANHVEDWRNRMIWLAGLGIAGFRCLGIGRLAPQAWYDLIA
ATRKSAPQTTFLAWTPGSAFEDRNALEGTGFDGSFSSLAWWNLEDRWIMDEYQIQRQIGY
QITFPEAPFGKRVANGIDSCEVLERKAVRALKLASTFASGLMIPMGFEYGVATPLDPMHG
DATGLPGLREVGSFDLSGDIRTVSAGTNKTAAGFARQPLRLVFASQAPTVALMQTEQEDI
RTSQKARVVVLNRDLRRVAHAPFNAVREAASAFLPLQALDAEDETFTAQLKLRPGELRLF
EGTSSIPIVDAVAVPRVEDAAASARLAIENIAPAVDEGRFVVKRVVGETVKVEADIFGDG
HDPLSAALLWRPADEANWNEVPMQLIENDRWQAEFTPKRMGRHEFLVEGWRNPFAIFRYE
FSKKHEARVDLRLEIQEGINHVLDALDNSSGRIKNRLRTVFDRLTEVQDPQRIEILLAAE
TAELMAKADRRPYRVRSQTIPLDAERAAAAFASWYQIFPRSQSGDPNRHGTFDDVIKRLP
AIRAMGFDVLYFTPIHPIGQTNRKGKNNSLQAAPADPGSPYGIGSEAGGHEAIHPELGTF
DDLRRLIEAAGDTGLEIALDLAIQCSPDHPWLSKHPGWFDWRPDGTIRYAENPPKKYEDI
VNVDFYAHDAIPALWIELRDIVQKWVDNGVKLFRVDNPHTKPFPFWEWLIADIRLRHPEV
VFLSEAFTKPKVMYRLAKIGFSQSYTYFTWRNAKWELEQYMREITTQEPKEFFRPHFFVN
THDINPDFLQNAPRPAYLVRAALAATLSGLWGVYNGFELCEGRPDAKRKEYADSEKYEIR
AWDYDRRGNIKSEIAMLNRIRNENPALHSHLGLQLLTAWNDNIMFYEKASTSRENALLIA
VNLDPYNAHEADVEIPLWSWNLPDDGALDLEDLITGLRSTWTGKIQRIRLDPHAGLPFAI
WRVR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcgctcccagttcgattcccgacgctccctcttgcggctgccgccgcagatt
tattacgtgcatcccttgatgctgaaggggtgcgatgcctggagagaggtctttgcgcat
gccaaggatcttggtctcgacacggtactcactgcccccgttttcgaacgcggccaaaat
gctagtgtctttgtcgtcaggaatttcgaccgtcttgaccctgaactgggactaggtgaa
tccgtcgaggacgggctcacggcgttggtccaggcggctcgagaaaaagacatcaagctg
atgctcgaccttgtcgtcgaccgggcagccctcgatgacaaagctgccgagccaattccg
gccgatccgcgggtgacaccgcatgaaagccgcagccgtcgcatcgatttcatcagcgaa
gccaaccacgtcgaggattggcgcaatcgcatgatttggcttgccggcctcggcatcgca
ggcttccgctgcttggggatcgggcgcctggcgccgcaagcatggtacgaccttatcgcc
gcgacccggaaatcggctccgcaaacgacctttcttgcctggacgccagggagcgccttc
gaagaccgcaacgcacttgagggaaccggatttgacggcagcttctcctcgcttgcatgg
tggaaccttgaggaccgctggatcatggacgaataccagatccaacggcagatcggctat
cagattaccttcccggaagcaccgttcggcaagcgcgtcgccaacggtatcgacagttgc
gaggttctagagcgcaaggctgtgcgagcactgaaactggcttccacatttgccagtggc
ctgatgatccccatgggcttcgaatacggtgtggccacgcccctcgatccgatgcatggc
gacgcaaccggcttgcctggacttcgtgaagtcggctctttcgatctctcaggcgacatt
cgcactgtgagcgcgggaaccaacaagaccgcggccggcttcgcccggcagccgctcagg
ttggtttttgccagtcaggcgccgacggtcgccttgatgcagaccgagcaggaggacatc
cgcacgtcgcagaaggcgcgcgtcgtcgtcctcaatcgcgacctgcggcgggtggcgcat
gcgccatttaacgcggtccgcgaagcggcctccgcttttctgccgctgcaggcactcgat
gcggaagacgaaacctttaccgctcagcttaaattgaggccgggtgaactgcgtctgttc
gaaggaacatcatcaattccgatcgttgatgcggtcgcggtacctcgtgtcgaggacgca
gcggcttctgcaaggctggctattgagaacatcgcgccggcggtcgatgaggggcgtttc
gtcgtcaagcgcgtcgttggcgagacggtgaaagtcgaagcagatattttcggcgatggc
catgatcccctgtcggcggccctgctctggcgaccggccgacgaggcgaactggaacgag
gtccccatgcagttgatcgaaaatgatcggtggcaggcggaattcacgccgaagcgcatg
gggcggcacgagtttttggtcgaaggctggcgcaatccattcgccatcttccgctacgag
ttcagcaagaagcacgaggcgcgggtcgatctgcgcctggaaatccaggagggcatcaac
cacgtgctcgatgcgctcgacaattcatccggtcggatcaaaaaccggctgcgaacggtc
ttcgacaggctgaccgaggtgcaggacccccagcggatcgaaatcctgctcgccgccgag
acggccgaactaatggctaaggccgatcgccgtccgtatcgggttcgctcgcagaccatc
ccgctcgatgcggaacgcgccgcagctgcgtttgcgagctggtaccagatttttccacgc
tcccagagcggcgatccaaaccgccacggcacctttgacgatgtcatcaaacgcctgcca
gccatccgcgcgatgggctttgacgtgctctatttcacgcccatccatccgatcggccag
acgaaccgcaaaggcaagaacaacagtctccaggccgcgccagcagatcccggcagcccc
tacgggatcggctcggaggcgggcggccacgaagcgatccatcccgagctcggcacgttc
gacgatttgcgtcggttgatcgaagcagctggcgacacaggtctcgaaatcgcgctcgac
ctggcaatccagtgctcgcccgaccatccctggttgagtaaacatcccggctggttcgat
tggcggccggatggcacgatccgctatgcggaaaatccgccgaagaaatacgaggacatc
gtcaacgttgatttctacgcccatgacgcgatccccgcactatggattgagttgcgcgac
atcgtacaaaaatgggtcgacaacggtgtcaagctcttccgcgtcgacaatccgcacacc
aaaccgtttccgttctgggaatggctaatcgccgatatccgcttgcggcatccagaggtc
gtcttcctatcggaggccttcaccaagccgaaggtcatgtatcggctcgccaagatcggc
ttttcacagtcatacacctattttacatggcgcaacgccaagtgggagctcgagcagtac
atgcgcgagatcaccacgcaggaaccgaaggaattcttccggccccacttttttgtcaac
acgcacgacatcaaccctgatttcctgcagaacgcgccgcgccctgcctatctggtccgt
gctgcgctcgccgcgacactgtctggactttggggcgtctataatggttttgagctttgc
gaaggccggcccgacgcaaagcgcaaggaatatgccgactcggaaaagtatgagattcgc
gcctgggactacgaccggcgggggaacatcaaatccgagattgccatgctcaaccggatc
cgaaacgagaacccggctctgcattcgcatctcggccttcagcttctcacagcctggaac
gacaacatcatgttctatgagaaggcaagcacgagccgtgagaacgctctgctgattgcc
gtcaacctcgatccatacaatgcacatgaagccgatgtggaaattccactctggtcatgg
aacctgccggacgacggcgcgctcgacctcgaggacttgatcaccggtttgagatccaca
tggaccggcaagatccagcgcattcggctcgatccgcatgcaggcctgccgttcgcgatc
tggcgcgtgagataa
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