Rhizobium favelukesii: LPU83_pLPU83c0569
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Entry
LPU83_pLPU83c0569 CDS
T03046
Symbol
vcaM
Name
(GenBank) putative ABC transporter ATP-binding protein HI1051
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rhl
Rhizobium favelukesii
Pathway
rhl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LPU83_pLPU83c0569 (vcaM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhl02000
]
LPU83_pLPU83c0569 (vcaM)
Transporters [BR:
rhl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LPU83_pLPU83c0569 (vcaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_16
AAA_30
Zeta_toxin
DUF6251
3HBD
Motif
LinkDB
All DBs
Position
pLPU83c:complement(531219..533099)
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AA seq
626 aa
AA seq
DB search
MSISDAIYRPFETLIRPLDIPYRPLPSKGPVAVLVHFISMFRGVLISLALSSMAMEAINL
TIVWGLSVIVDGVSQKGASAFLHREWPLLTFLGLLIFPAMPIASFLLNTLNSHTLGIGMP
AAIQWQGHKAVERQDLAFFHDLYAGQVASRLQQVSSAVQQQIIAAFQSIPRFLLQLVGSV
VLLSSLSWQLALPVVIWIALNVALTIKMAPIFAERSRRTAKQRSLVAGAITDLYTNMQMI
KQFAAEDSEAGAISRIIRKAIHTQHGEQRIYRTSELIVVVLNTTLWLVMLAIGFSGLVNG
FLTVGEFVGAVYILQRLSTQIFTFLQMGQQIFQAIGTIKDAMPVMTTPPTIIDRPDAASL
TVNSGEIRFQDVSFAYKSGKPVIDNLSLTVRPGEKVGLVGLSGAGKTTLVSLLLRFYDIG
DGAILIDGLDIRTVTQASLRRNIGVIAQDVALLHRSVGDNIRYGRPEATKDEIEHAAKTA
RADVFITDLADGEGRKGYDAFVGDRGIKLSGGQRQRVAIARVLLKDAPILVLDEATSALD
SESEAAIQEKLNLVMEGKTVIAIAHRLSTIAMMDRIVVLDQGRILEEGRPDELVERDGLF
ARLWKRQTGGFIPEEINEPLPASPAT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatttcagatgcgatctaccgtcccttcgaaacgctgatccgcccgctcgatatt
ccctaccggccgctgccttccaaggggcccgtagccgtcctcgtgcacttcatctcgatg
ttccgtggcgtgctgatttccctcgcactttcatccatggcgatggaggccatcaacctg
accatcgtctgggggctttcggtcattgtcgatggcgtatcgcagaagggcgcatccgcc
ttcctgcaccgcgaatggccactcctgacgtttctcgggcttctgatctttccggccatg
ccaatcgcctccttccttctaaacacactcaactcgcatacgctcggcatcggcatgccg
gccgccatccagtggcaggggcacaaggcggtggagcggcaggatctcgcctttttccat
gatctctacgccggacaggtcgcctcgcgcctgcagcaggtatcgtccgccgtccagcag
cagatcattgctgccttccagtccattccgcgcttcctgctgcagctggtcggctcagtg
gtcctgctgtcgagcctgtcctggcagctcgccttgccagtcgtaatctggatcgcgctc
aatgtggcgctcaccatcaagatggcgccgatctttgccgagcgttcgcgccgcaccgcc
aagcagcgcagcttggtggccggcgccatcaccgatctctacaccaacatgcagatgatc
aagcagttcgccgccgaagacagcgaagccggcgccatcagccgcatcatccgaaaggcc
atacacacgcagcacggagaacagcgcatctaccgcacctcggaactgattgtcgtggtc
ctcaacacgacgctctggctggtgatgctggcgatcggtttctcgggtctcgtcaacggc
tttctgacggtcggcgagttcgtcggcgcggtctacattctccagcggctctccacgcag
atcttcaccttcctgcagatgggccagcagatcttccaggcgatagggacgatcaaggac
gcgatgccggtgatgacgacgccgcccaccatcatcgatcggcctgacgcggcgagcctc
acggtcaacagcggcgaaattcgtttccaagacgtttcttttgcatacaagtctggaaag
cccgtcatcgataatctgtctctgacggttcggcccggcgagaaggtggggctggtcggc
ctctccggggcaggcaagacgacgctggtgagtctgctgctgcgtttctacgacatcggg
gacggcgcgatcctgatcgacggtctggacatccgcacggtcacgcaggcaagtcttcgc
cgcaacatcggggtcatcgcgcaagacgtcgcgctgctgcaccgatcggtcggcgacaat
atacgctatggccgaccggaggcgacaaaggatgagatcgaacacgccgcgaagacagca
agggccgatgtattcatcaccgatcttgcggacggcgaaggccgtaagggttatgacgcc
ttcgtcggagaccgcggcatcaagctatccggtggtcaacggcagcgcgtagcaatcgcc
cgcgttttgctgaaggacgcgccgatcctcgtgctcgacgaggcgacctccgccctcgac
agcgaatctgaggccgccattcaggaaaaactcaacttggtgatggagggcaagacggtg
attgccatcgcacatcgcctttcgaccattgccatgatggaccgcatcgtcgtgctagat
cagggccgtatcctagaagaaggcaggccggacgaactggtcgaacgggatggcttgttt
gcccgtctgtggaaacgccagaccggcggctttattcctgaagaaatcaacgaacctttg
ccggcatcgccagcgacctaa
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