Rhizobium favelukesii: LPU83_pLPU83c0609
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Entry
LPU83_pLPU83c0609 CDS
T03046
Name
(GenBank) hypothetical protein
Organism
rhl
Rhizobium favelukesii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DMFA2_C
DUF4082
He_PIG
Cadherin_4
Big_9
Big_7
Mo-co_dimer
BNR
Motif
LinkDB
All DBs
Position
pLPU83c:565449..570371
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AA seq
1640 aa
AA seq
DB search
MYRKARRWASRSVLLDSLVPRWLAAGGKVRPRNTSYRREESSQLASSVPTTDANKYGTFG
DSPVKNSALNEYDSGRRGDLVCGADGKVNIDCVLPSLTNTFATIREPRFAPFSRGAPSAQ
ATAHLAGAHSSAVGMPFGVWGCGYFTSPTRILDWAQRGGMLQQDGQLPGTRPTEGPDYVT
TVKRTFGASISDPLLDRDLSPLSGWRGTATWTETTVWNGSLPGGGEIGTGTAHSKGIGIL
SGSVTTPLGTQTTLAQNVAAAATAVNPIVLENQKPGNPESEWGIDGAGSSNIEGFATDIS
VNRGQTVSFKINTNSSNYRVDIYRLGYYGGMGARKVATIQHTGVQNQPTPLRDSTTGLVD
AGNWSVSASWAIPADAVSGIYFAKLVRQDGTAGANHIPFIVRDDSSHSDVLFQTSDETWQ
AYNPWGGANLYQGNGPATDSAPGRAYAVSYNRPITTRGGGLAAGPQDYIFGAEYPAIRWL
EKNGYDVSYMAGMDSDRLGSLIQNHKMFLSVGHDEYWSGQQRSNVEAARDAGVNLCFWSG
NEVYWETRFAPSISSGAQAYRTLVCYKETRAGPIDPDNQWTGTYRDPRFVSPTAVGGGRP
ENALTGTMFQVDSYRSDAITVPYDDANLRFWRDTSVANLQPGQTATLEQNYLGYEWDESP
DNGLRPAGLIELSSTTLPVNEYLLDYGTKTGTATATHNLTLYRAPSGALVFGAGTVYWAW
GLDENHDLEATPVDPRVKQAMVNLLADMGIQPGTLEAGLVSETQSTDATKPVSSITAPND
GTALKVGNAVTVSGTASDIGGVIAAVEVSTDGGTTWHRAVGDETWTYSWVAPRAGTFTIK
TRAVDDSLNLETPGSGRTVTVTGNNFFPASAIPPTVPDADANSIEVGMKFQSSVAGTVTG
VRYYKSDLNIGPHSGSLWSSTGTRLATVTFTNESGVGWQAASFSNPVAITAGTTYVVSYH
TNYGHYTATGNYFATPVTNGPLTAPTNAGVYTYNSASVFPSSTFNGENYWVDVLFNPTTS
GNTTPTAVADVGDATEKGGVANGSGGVAASGNVLTNDTDPDAGDTKTVTAVSFGATAGTL
GSALNGTYGSLVLNASGTYTYAVNENNAAVQALRQSTNTLNDAFSYTMRDTAGATATASL
TVTIHGANDAPVLAAQTATQNATVGTAFSFVLPANTFTDVDSGETFTYAATAADGSSLPA
WLSFNATTRTFSGTPTTAGTYGVKVTATDLGGLAANETFNIAASTTPNTTPTAVADAGDA
TEKGGVANGSGGVAASGNVLTNDTDPDAGDTKTVTAVSFGATAGTLGSALNGTYGSLVLN
ASGTYTYAVNENNAAVQALRQSTNTLNDAFSYTMRDTAGATATASLTVTIHGANDAPVLA
AQTATQNATVGTAFSFVLPANTFTDVDSGETFTYAATAADGSSLPAWLSFNATTRTFSGT
PTTAGTYGVQVTATDLGGLAANETFNIAASTAPTTYSLFSASNTPAQTNLNDGQQLELGV
KFQSNVVGDITGIKFYRSANDNGQNVVDLWTTAGTKLATATFTNTSASGWQTVNFATAVS
IAANTTYIASYHTTGAYVATDGFFTSPVTNGPLTALSSAAAGGNGVYRYGGSATTGIFPN
ATYNAANYWADVVFRPQLAA
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaaagctcgccggtgggcttcccgctcagtactattggattcgttggttccc
cggtggttggctgccggtggaaaggtgaggccgcgcaatactagctacaggcgcgaagaa
tcttctcaacttgcgtcatccgtaccgactacagatgcgaacaagtacggcacctttggc
gacagtcccgtcaaaaactctgcgctcaacgagtatgacagtgggcggcgaggggacctg
gtctgcggcgcggacggtaaggtcaatatcgactgtgtattgccgtcgttgaccaacact
ttcgcaacgattcgcgaacctcgttttgcacctttctcgcgcggtgctccgtcagcgcag
gcgactgcgcaccttgccggagctcattcatcagctgttggcatgccctttggcgtctgg
gggtgcggctactttacctctcccacgcggattctcgattgggcccagcgcgggggtatg
cttcaacaggacggtcaattgccggggaccaggccgaccgagggtccggactatgtgacg
acagtcaagcggacattcggcgcctcgatcagcgacccgcttctggatcgtgacttgtct
cctctttcgggctggcgcggaactgcaacgtggacagaaacaacggtctggaacggatca
ttgccaggcggcggagagatcggaacgggaaccgctcactctaagggcatcggcatcctt
tctggctcggttaccacaccgttgggcacgcaaacaacattggcgcaaaatgtggcggcc
gcggcgacggccgtcaacccgatcgtgctggaaaaccagaaacccggcaatccggagagt
gagtggggcattgacggcgccggcagctcgaatatcgagggcttcgccaccgatatcagc
gtcaatcgcggccagaccgtcagcttcaaaatcaatacgaattccagcaactatcgcgtc
gacatctatcgcctcggctattacggcggcatgggagctcgcaaggttgccacgattcag
catacgggcgtccagaaccagcctacgccgttgcgtgacagcaccaccggtttggtcgac
gccggcaactggtcggtttcagcgtcctgggcaattccggccgacgcagtgtcggggatc
tacttcgccaagctcgtgcgccaggacggaaccgccggcgcaaaccacatcccgttcatc
gtgcgcgacgacagcagccacagcgacgtcctcttccaaacctcggatgagacctggcag
gcctacaacccctggggcggggccaatctgtaccagggcaacgggccggcgacagactcc
gccccagggcgcgcatacgcggttagctacaatcgaccgatcaccacgaggggcggcggc
ctcgcggccgggccgcaggattatatcttcggtgccgagtacccggccatccggtggctg
gagaagaacggctatgacgtttcctatatggccggaatggactccgatcgcctcggcagc
ctgatccagaaccacaagatgttcctgagcgtcggccacgacgagtattggtcgggacaa
cagcgcagcaacgtcgaggcagcgcgggatgctggcgtgaatctctgcttttggagcggc
aacgaggtctattgggagacccgctttgctcccagcatcagttctggcgcccaggcgtat
cgcaccctggtgtgctacaaggagaccagggccggccccattgatccggataaccaatgg
actggaacctaccgggatccgcggttcgtctcgccgactgcggtcgggggagggcggccg
gagaatgcgctgactggcaccatgttccaggtcgactcgtaccgaagcgatgcgatcacc
gtcccgtatgacgacgccaatctgcgcttctggcgcgataccagcgtggcaaacctgcag
ccgggccagacggccaccctcgagcagaactatctcggatatgaatgggatgagtcaccc
gacaatggcttgcgtcccgccggactcatcgagttatcctcgacaaccttgcccgtcaac
gaatatctgctggactacggcaccaagaccgggacggccaccgcgactcacaatctgacg
ctttaccgagctcctagcggcgccttggtgttcggcgccggcacagtttactgggcgtgg
gggctcgatgagaaccatgatctcgaggccaccccggtcgacccccgggtcaagcaggct
atggtcaacctgctggccgacatgggtatccagcctggcaccttggaggccggactggta
tcagaaacccagtcgacggatgccacaaagccggtgtcatcgatcaccgcgccgaatgac
gggaccgccctgaaggtaggcaatgccgtcaccgtcagcggaaccgcttccgatatcggc
ggcgtcatcgctgcggtcgaggtctcgacggatggcggcaccacgtggcaccgggcggtt
ggagacgagacctggacatacagctgggtcgcgccgagagccggcacgttcaccatcaag
actcgggcagtggacgacagcctcaatctggagacacccggtagcggccgcactgtgacg
gtgaccggcaacaacttctttcccgcttcggccataccgcccaccgtgccggatgccgat
gccaactcgattgaagtgggaatgaagttccaatcgtcagtggccggcaccgtaacgggc
gtacggtactacaagagcgacttgaacatcgggccacattcgggctcgctgtggtcgagc
acgggaaccaggctggcgacggtcaccttcaccaacgagtcaggggtaggctggcaggcg
gcgagcttttccaacccggtcgcgatcaccgctggcacgacatatgtggtctcgtatcac
accaactacggacactataccgcaacgggaaactatttcgcgacccccgtgacaaatgga
ccacttacggcgccgacgaatgccggtgtctacacctacaattcggccagcgtcttcccg
agcagcaccttcaacggcgagaactactgggtcgatgttttattcaacccgacgacctcg
ggcaacacgacgccgacggcggttgccgacgtaggggacgcgaccgagaagggcggcgtc
gccaatggctcgggcggcgtggccgccagcggcaacgtgctcaccaacgacaccgatccg
gatgccggtgacaccaagaccgtcacggcggtcagcttcggcgcgacggccggcacgctc
ggctcggcgctgaacggcacgtacggcagtctcgtgctcaatgcatcgggcacctacacc
tatgccgtcaacgagaacaatgccgccgtgcaggcgctgcggcagtccaccaacacgctg
aacgatgccttcagctacaccatgcgtgacaccgccggtgccaccgccacggcaagcctc
accgtcaccatccacggcgccaacgatgcgccggtgctcgcggcgcagactgccacccag
aacgccaccgtcggcactgctttttcgtttgtgctgccggccaacaccttcaccgatgtc
gacagcggcgaaaccttcacttacgcggcaaccgccgccgacggttcgtcgcttccggcc
tggctgagcttcaacgccacgacgcggaccttcagcggcacgccgacgacagccggcacg
tacggcgtcaaggtaacggcaaccgacctcggcggcctggctgccaacgagaccttcaac
atcgccgcgtcgacgacgccgaacacgacgccgacggcggttgccgacgcgggggatgcg
accgagaagggcggcgtcgccaacggctcgggcggcgtggccgccagcggcaacgtgctc
accaacgacaccgatccggatgccggtgacaccaagaccgtcacggcggtcagcttcggc
gcgacggccggcacgctcggctcggcgctgaacggcacgtacggcagtctcgtgctcaat
gcatcgggcacctatacctatgccgtcaacgagaataatgccgccgtgcaggcgctgcgg
cagtccaccaacacgctgaacgatgccttcagctacaccatgcgtgacaccgccggtgcc
accgccacggcaagcctcaccgtcaccatccacggcgccaacgatgcgccggtgctcgcg
gcgcagactgccacccagaacgccaccgtcggcactgctttttcgtttgtgctgccggcc
aacaccttcaccgatgtcgacagcggcgaaaccttcacttacgcggcaaccgccgccgac
ggttcgtcgcttccggcctggctgagcttcaacgccacgacgcggaccttcagcggcacg
ccgacgacagccggcacgtacggcgtccaagtaacggcgaccgaccttggcggcctggct
gccaacgagaccttcaacatcgccgcgtcgacggcccccacgacctatagcctattcagc
gcctccaacacgccggcccagacgaacctcaacgatggtcagcaactcgagctcggcgtc
aagttccagtcgaacgttgtcggtgatattacgggcatcaagttctaccgcagcgccaac
gacaacggccagaacgtcgtcgacctgtggaccaccgcaggcaccaagctcgccaccgcc
accttcaccaacacctcggcgagtggttggcagacggtgaactttgcgacggctgtctcc
atcgccgccaacaccacctatatcgcgtcgtatcacacgaccggtgcctacgtggcgacc
gatggcttcttcaccagtcccgtcaccaatggcccgctgacggccctgtcaagcgccgcc
gccggtggcaacggcgtctaccgctatggcggatccgccactacaggcattttcccgaat
gccacctacaacgctgccaactattgggccgatgtggtcttccggccgcagctcgccgcg
tga
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