Rhizobium favelukesii: LPU83_pLPU83d0116
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Entry
LPU83_pLPU83d0116 CDS
T03046
Symbol
pcaH
Name
(GenBank) Protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00362
Benzoate degradation
rhl01100
Metabolic pathways
rhl01120
Microbial metabolism in diverse environments
rhl01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LPU83_pLPU83d0116 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
LPU83_pLPU83d0116 (pcaH)
Enzymes [BR:
rhl01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
LPU83_pLPU83d0116 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
Motif
LinkDB
All DBs
Position
pLPU83d:113527..114276
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AA seq
249 aa
AA seq
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MSDLPNRMPETGAFFARDREWHAPAFTPGYKTSVLRSPQRALLSLDGTISEITGPVFGHS
MIGELDNDLIHNFAKPGESAIGERIVVHGRVLDERGRAVPGALVEFWQANAGGRYRHKKE
TYLAAIDPNFGGCGRSITDEDGQYAFRTVRPGAYPWPNGVNDWRPAHIHFSIFGHGFAQR
LITQMYFEGDPMIWKCPIVGTIPDKRAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRST
MFENRPEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctccctaaccgcatgcccgaaaccggcgccttctttgcacgtgaccgagaa
tggcacgcgcccgccttcacccccggctacaagacgtcggtcctgcgctcgccgcagcgc
gccctgctttcgctcgacggcacgatctcggagatcaccggtcctgtctttggccattcg
atgatcggcgaactcgacaatgacctgatccacaacttcgccaagccaggcgagagcgcc
atcggcgagcgcatcgtggttcatggccgcgtgcttgacgaacgcggccgggcggtgccc
ggtgcgcttgttgaattctggcaggccaatgccggcggccgctaccgccacaagaaggaa
acctatcttgccgccatcgatccgaacttcggcggctgtgggcgctccatcaccgatgaa
gacggtcaatatgcgttccgtaccgttcgtccgggcgcctatccctggccgaacggtgtc
aatgactggcgaccggcccatatccacttctcgatcttcggccacggctttgcccagcgc
ctgatcacacaaatgtatttcgagggggatccgatgatctggaagtgtccaatcgtcggc
acgatccccgacaagcgcgccatcgagcaattgattgcgccgctcgactggggcaacaca
attccaatggatgcacgcgcctataaattcgacatcgtgctgcgcggtcgccgctcgacg
atgttcgaaaaccggccggaggggaactga
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