Rhizobium favelukesii: LPU83_pLPU83d0202
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Entry
LPU83_pLPU83d0202 CDS
T03046
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00550
Peptidoglycan biosynthesis
rhl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPU83_pLPU83d0202
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhl01003
]
LPU83_pLPU83d0202
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhl01011
]
LPU83_pLPU83d0202
Enzymes [BR:
rhl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LPU83_pLPU83d0202
Glycosyltransferases [BR:
rhl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LPU83_pLPU83d0202
Peptidoglycan biosynthesis and degradation proteins [BR:
rhl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LPU83_pLPU83d0202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
LinkDB
All DBs
Position
pLPU83d:complement(219251..221332)
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AA seq
693 aa
AA seq
DB search
MRLTRKLAIGSVAGIFLAGAGLFLLEAADQAYPPPLDKAYAVSAEVLDADGQLLRAFATP
DGLWRLKTTGTDVDPQFLKMLVAYEDRRFYTHGGIDLQAIARAAVQFVTNGRIVSGASTL
SMQVARLIEPRQGRSLSAKLLQMARAIQIERRLTKDEILNLYLTHAPYGGNLEGARAASL
AYFGKEPRRLTVAEAALLVALPQLPEKRRPDRNLAAALTARKRVLERVGVAEAVGEGEAA
RAEVVPVPARRMQLPALAAHVAEAARRKDPKALQYGTTLKKTVQTGLEAVARAAALKLGP
KLSIAMVMADAQTGDIVGEVGSADYFDASRSGWIDMTRASRSPGSTLKPFIYGLAFEEGL
VSQETIIEDRPADFFGYRPRNFDMSYQGDVTVREALQLSLNVPAVKLLDAVNPAKLLIRF
RRAEVRPLLPPNETPGLAIGLGGLGITLKDLVQLYTALANRGRPSLIGDGVNERPGKIDG
EGLLDPVAVWNVADILSGVIPPPGAPKRGIAYKTGTSYGYRDAWSVGYDGRYVLGVWVGR
PDNGAAPGLTGYGTAAPILFEGFAKSGIATTPLPRPPSGALRIAQAELPISQRRFAINQN
GLLTTSSREPAPQIVYPPEGAHVDLGARTGDLSPLMLKLQGGRAPFRWLANGKPLPDVSR
RRTNQWIPDGGGYSKLTVIDAMGRAASVGVFVE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagactgacaaggaagctcgcgattggaagcgttgctggcatcttccttgccggcgct
gggctgttcttgctcgaggctgccgaccaggcctatccgccgccactcgacaaggcctat
gcggtatctgcggaagtgctcgatgcggacggtcagttgctgcgggccttcgcaacaccg
gacggtctgtggcgtctcaaaaccactggcaccgatgtcgatccacaattcctcaagatg
cttgtcgcctacgaggatcggcggttttacacacatggcggcatcgatctgcaagcgatc
gcacgtgccgccgtccagttcgtcaccaatggccgcatcgtctccggcgcatcgacgctg
tcgatgcaggtcgcgcggctgattgaaccacgccaaggccgctctttgtcggcgaagctc
ttgcagatggcacgcgcgatccagatcgaacggcggctaacgaaggatgagatcctaaat
ctctatctgacgcacgcaccctatggcggtaatctcgagggcgcgcgggctgcaagcctt
gcgtatttcggcaaagagccgcggcggctgacggtggccgaggccgccctcctcgtcgcg
ctgccgcagctgccggaaaagcgccgcccggaccgcaatcttgcggccgcgctgacggct
cgcaaacgggtgctggagcgtgtcggcgtcgccgaagctgttggcgagggggaggcggca
cgcgctgaagtcgtaccggtgccggcacggcgcatgcagctcccggcgctcgccgcccat
gtggccgaggcggcccgccgcaaggatccgaaagcgctgcaatacgggacgacgctgaag
aagacggtgcagaccggattggaagccgttgcccgcgccgccgcattgaaactcggtccg
aagctgtcgatcgccatggtcatggcggatgcgcagacgggcgacatcgtcggcgaggtc
ggttctgccgattacttcgatgccagccgctctggctggatcgacatgacgcgcgccagc
cgctcgccgggctcgacgctaaaaccgttcatttacggtctggcattcgaggaaggtctc
gtcagccaggagacgatcatcgaggatcgccccgccgatttcttcggctaccgcccacga
aatttcgacatgagctatcagggcgatgtcacggtgcgcgaggccctgcagttgtccctg
aacgtgccggccgtaaagctgcttgatgccgtcaatccggcgaagctgctgatccgcttt
cgccgcgccgaggtgcggcctcttttgcccccgaacgaaacaccgggtcttgcaatcggt
ctcggtggcctcggcatcacgctgaaggatttggtgcagctctacaccgcgctcgccaat
cgtggccggccttcgctcatcggcgacggcgtcaacgagcggccgggcaagatcgatggg
gagggcctgcttgacccggtggccgtctggaatgtcgccgacatcctctccggcgtcatt
ccaccgcccggcgctcccaaacgagggatcgcttacaagaccggtacgagctacggctac
cgcgatgcgtggtcggttggttatgatggacgctatgttcttggcgtttgggtcggtcgc
cctgacaacggggctgcgccgggattgacagggtacgggactgcggcccctatcctcttt
gagggttttgcaaagtcggggatcgcaaccacgccccttccccgcccgccatcgggagca
ttgcggatcgcacaggccgaactgccgatcagtcaacgtcgcttcgccatcaaccaaaat
ggcctgttaacaacatcgagccgtgaaccggcaccgcagatcgtctatccacctgagggc
gcgcatgtcgaccttggcgcaagaactggcgacctatcgccgttgatgctgaagttgcaa
ggcggacgggcgcctttccgctggcttgccaacggcaaaccattgcccgacgtctctcgg
cgtcgcaccaatcagtggattccggatggtggcggttactcgaagctcacagtgattgac
gccatgggccgggccgcaagcgtcggtgtcttcgtcgaatga
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