Rhizobium favelukesii: LPU83_pLPU83d0221
Help
Entry
LPU83_pLPU83d0221 CDS
T03046
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00300
Lysine biosynthesis
rhl00470
D-Amino acid metabolism
rhl01100
Metabolic pathways
rhl01110
Biosynthesis of secondary metabolites
rhl01120
Microbial metabolism in diverse environments
rhl01230
Biosynthesis of amino acids
Module
rhl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPU83_pLPU83d0221
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPU83_pLPU83d0221
Enzymes [BR:
rhl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LPU83_pLPU83d0221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
LinkDB
All DBs
Position
pLPU83d:243579..244781
Genome browser
AA seq
400 aa
AA seq
DB search
MFDVAEDCLAVGGVRLDRLADRVGTTPFFAYDRRLITARVAYLRSVLPKDVKLSYAIKAN
PMPAVVQHLAGLVDSFDVASAFEMKTALDTVVPSSSISFAGPGKTAIELAQAVAAGVTIE
MESESEASRIIEAGNRLGIRPRVALRVNPNFQVKGSGMKMGGGPQQFGVDAEEVPSLLEK
LASADLDFLGFHVFAGSQNLHSDILCEALSRNVELLLDLSGKYGHSVRYLNLGGGFGIPY
FEKDRSLDLVPVGKRLTELVENTIRPLLPGAKIVIELGRYLVGESGVYVTRVVDRKVSRG
RVYLVVDGGLHHQLAASGNFGQVIRRNYPIVIGNKMNSIEREIVSVVGCLCTPLDLLGDN
VSLPPADVGDLVVVFQAGAYGLTASPTAFLGHPMPPEVLV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgttgctgaagactgcctggctgtcggcggagtccgcctggatcgtctcgcc
gaccgcgtcggaacgacacccttcttcgcttacgaccgccgattgataaccgcgagagtg
gcctatctccgctcggttctgccgaaggacgtcaaactcagctatgccatcaaggcgaac
ccgatgccggcagtggttcagcacctggcgggacttgtcgattcattcgatgtcgcttcc
gcattcgaaatgaaaaccgcgctggataccgtggtgccttcctccagcatcagttttgcc
ggacccggcaaaacggcgatcgaattggcccaggctgtcgctgctggcgtgacgatcgag
atggaatcggagtcagaggcttcgcgcattatcgaagctggaaatcgtctcggcatccga
ccaagggtcgccttgcgagtaaacccgaatttccaggtcaagggctcggggatgaagatg
ggcggcggaccgcaacagttcggcgttgatgccgaagaggtgccgtcgctgcttgaaaaa
ctggccagcgcagacctggatttcctcggatttcatgtattcgcgggctcacaaaatctc
cactcggatattctttgcgaagctctctctcggaatgtcgaactgctgctggatctttcc
ggaaagtatggtcactccgttcgctacctaaatctcggtggcggtttcgggatcccgtac
tttgaaaaggaccgctctctcgatctcgttcctgtagggaaaaggcttaccgagctggtt
gaaaacacaatccgccctttattgcctggtgcgaaaattgtcattgagctcggccggtac
cttgtcggcgagtctggcgtctatgtcacgagagtggttgaccgcaaggtttcgcgagga
cgggtctatctggtcgttgacggagggctccatcatcaactggctgcatcaggtaatttt
ggccaggtaattcgccgcaactatcccatcgtcatcggcaacaagatgaatagcatcgag
cgggagatcgtttcggtggtcgggtgcctttgcaccccgctggatctgctcggcgacaat
gtctctttgccgcccgcagacgtgggcgatctcgtcgttgtcttccaagccggcgcatat
ggcttgaccgcaagcccaaccgcatttctgggtcatcccatgccgccggaggtgctcgtt
tga
DBGET
integrated database retrieval system
