Rhizobium favelukesii: LPU83_pLPU83d0278
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Entry
LPU83_pLPU83d0278 CDS
T03046
Symbol
lpdV
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00010
Glycolysis / Gluconeogenesis
rhl00020
Citrate cycle (TCA cycle)
rhl00260
Glycine, serine and threonine metabolism
rhl00280
Valine, leucine and isoleucine degradation
rhl00310
Lysine degradation
rhl00380
Tryptophan metabolism
rhl00620
Pyruvate metabolism
rhl00630
Glyoxylate and dicarboxylate metabolism
rhl00640
Propanoate metabolism
rhl00670
One carbon pool by folate
rhl00785
Lipoic acid metabolism
rhl01100
Metabolic pathways
rhl01110
Biosynthesis of secondary metabolites
rhl01120
Microbial metabolism in diverse environments
rhl01200
Carbon metabolism
rhl01210
2-Oxocarboxylic acid metabolism
rhl01240
Biosynthesis of cofactors
Module
rhl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhl_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LPU83_pLPU83d0278 (lpdV)
00020 Citrate cycle (TCA cycle)
LPU83_pLPU83d0278 (lpdV)
00620 Pyruvate metabolism
LPU83_pLPU83d0278 (lpdV)
00630 Glyoxylate and dicarboxylate metabolism
LPU83_pLPU83d0278 (lpdV)
00640 Propanoate metabolism
LPU83_pLPU83d0278 (lpdV)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPU83_pLPU83d0278 (lpdV)
00280 Valine, leucine and isoleucine degradation
LPU83_pLPU83d0278 (lpdV)
00310 Lysine degradation
LPU83_pLPU83d0278 (lpdV)
00380 Tryptophan metabolism
LPU83_pLPU83d0278 (lpdV)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LPU83_pLPU83d0278 (lpdV)
00670 One carbon pool by folate
LPU83_pLPU83d0278 (lpdV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhl04147
]
LPU83_pLPU83d0278 (lpdV)
Enzymes [BR:
rhl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LPU83_pLPU83d0278 (lpdV)
Exosome [BR:
rhl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LPU83_pLPU83d0278 (lpdV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
DAO
NAD_binding_8
FAD_oxidored
GIDA
UDPG_MGDP_dh_N
FAD_binding_3
Lys_Orn_oxgnase
AlaDh_PNT_C
3HCDH_N
Motif
LinkDB
All DBs
Position
pLPU83d:complement(315899..317296)
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AA seq
465 aa
AA seq
DB search
MKEIVCKLLVIGAGPGGYVCAIRAGQLGLDTVIVEADKPGGTCLNVGCIPSKALIHAAEE
FGAAKQMLTGRNAMGIGIEAATIDLAKTIAWKDGIVGRLNSGVSALLQKARVKIVHGRAA
FRDGKTVEVETETGMQVIRAETVVIATGSKPVELSALPFGGRVISSTEALSLGEVPKRLV
VVGGGYIGLELGIAFAKLGSEVTVVEATQQILPQYDADLVRPVARRLGDLGIRTLTGAEA
KSLSDDGNALVVETSGGQQQLLPADRVLVTVGRRPRSAGSGIEELDLDRSGPYLRIDDRC
RTSMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIIAGRKRAWDKRCIPAICFTDPEIVTAG
LSPDEARAQGYAIRVGQFPFSANGRAMTMLSEEGFIRVVARADTNLVLGLQAVGVGVSEL
SAGFALAIEMGARLEDLAGTIHAHPTRSEALQEAALKALGHALHA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatcgtctgcaagcttctcgtcatcggcgctggacccggcggttatgtctgc
gccattcgagccgggcaactcggtctcgacaccgtcatcgtcgaggctgacaagccgggt
ggcacctgcctcaacgtcggatgcattccttccaaggccctcatccatgcggccgaggag
tttggtgctgccaagcagatgctgaccggcagaaacgcaatgggcatcggtatcgaggcc
gcgaccatcgacctcgccaagaccattgcctggaaggacggcatcgtcggccgcctgaac
agcggtgtctccgcgctgctgcagaaggcaagggtcaagatcgttcacggccgcgcggcc
ttccgcgacggtaagacggtcgaggtcgagaccgagacgggcatgcaggtcatccgcgcg
gagactgttgttatcgccacaggttctaagcccgtggaactttccgcccttcctttcggc
ggtcgggtgatctcgtccaccgaggcgctctcgctcggcgaagtgccgaagagactggtt
gtcgtcggaggcggttacattggcctcgaactcggtatcgcttttgccaagctgggctca
gaggtaacagtcgtcgaagccacccagcagatactgccgcaatatgatgccgacctggtg
cgacccgtcgcgcgccggcttggtgatctcggcattcgcaccctgacgggagcggaggca
aagagcctctcggacgacggcaatgcacttgtcgtcgagacatcgggcggacagcaacaa
ctgctgcctgccgaccgggtgcttgtcacggtcggtcggcggccgcgatcggcaggctca
ggtatcgaagagctcgatctcgatcgcagcgggccgtaccttcgcatcgatgatcgctgc
cgcacctccatgcggggcgtctatgcaatcggcgacgtcaccggtgaaccgatgctggcc
catcgcgccatggcgcagggagaaatggtcgccgagatcattgccggcaggaagcgcgcc
tgggacaaacgctgcattccggcgatctgctttaccgatccggaaatcgtgactgccggg
ctttcgccggacgaggcacgtgctcaaggctatgcgatccgcgtcggacaattcccgttc
agcgcaaatggccgggcgatgaccatgctgtcggaggagggcttcatacgcgtcgtcgcc
cgggccgataccaatctcgtccttggcctgcaggccgtaggcgtcggcgtttccgaactc
tcagcgggttttgcactggccatcgagatgggcgcgcggctggaggacctcgccggtacg
atccatgcgcatccgacgcgcagcgaggctctccaggaggctgccctcaaggcgctcggg
cacgcattgcacgcctga
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