KEGG   Rhizobium favelukesii: LPU83_pLPU83d0278
Entry
LPU83_pLPU83d0278 CDS       T03046                                 
Symbol
lpdV
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhl  Rhizobium favelukesii
Pathway
rhl00010  Glycolysis / Gluconeogenesis
rhl00020  Citrate cycle (TCA cycle)
rhl00260  Glycine, serine and threonine metabolism
rhl00280  Valine, leucine and isoleucine degradation
rhl00310  Lysine degradation
rhl00380  Tryptophan metabolism
rhl00620  Pyruvate metabolism
rhl00630  Glyoxylate and dicarboxylate metabolism
rhl00640  Propanoate metabolism
rhl00670  One carbon pool by folate
rhl00785  Lipoic acid metabolism
rhl01100  Metabolic pathways
rhl01110  Biosynthesis of secondary metabolites
rhl01120  Microbial metabolism in diverse environments
rhl01200  Carbon metabolism
rhl01210  2-Oxocarboxylic acid metabolism
rhl01240  Biosynthesis of cofactors
Module
rhl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LPU83_pLPU83d0278 (lpdV)
   00020 Citrate cycle (TCA cycle)
    LPU83_pLPU83d0278 (lpdV)
   00620 Pyruvate metabolism
    LPU83_pLPU83d0278 (lpdV)
   00630 Glyoxylate and dicarboxylate metabolism
    LPU83_pLPU83d0278 (lpdV)
   00640 Propanoate metabolism
    LPU83_pLPU83d0278 (lpdV)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LPU83_pLPU83d0278 (lpdV)
   00280 Valine, leucine and isoleucine degradation
    LPU83_pLPU83d0278 (lpdV)
   00310 Lysine degradation
    LPU83_pLPU83d0278 (lpdV)
   00380 Tryptophan metabolism
    LPU83_pLPU83d0278 (lpdV)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LPU83_pLPU83d0278 (lpdV)
   00670 One carbon pool by folate
    LPU83_pLPU83d0278 (lpdV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhl04147]
    LPU83_pLPU83d0278 (lpdV)
Enzymes [BR:rhl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LPU83_pLPU83d0278 (lpdV)
Exosome [BR:rhl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LPU83_pLPU83d0278 (lpdV)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like DAO NAD_binding_8 FAD_oxidored GIDA UDPG_MGDP_dh_N FAD_binding_3 Lys_Orn_oxgnase AlaDh_PNT_C 3HCDH_N
LinkDB
Position
pLPU83d:complement(315899..317296)
AA seq 465 aa
MKEIVCKLLVIGAGPGGYVCAIRAGQLGLDTVIVEADKPGGTCLNVGCIPSKALIHAAEE
FGAAKQMLTGRNAMGIGIEAATIDLAKTIAWKDGIVGRLNSGVSALLQKARVKIVHGRAA
FRDGKTVEVETETGMQVIRAETVVIATGSKPVELSALPFGGRVISSTEALSLGEVPKRLV
VVGGGYIGLELGIAFAKLGSEVTVVEATQQILPQYDADLVRPVARRLGDLGIRTLTGAEA
KSLSDDGNALVVETSGGQQQLLPADRVLVTVGRRPRSAGSGIEELDLDRSGPYLRIDDRC
RTSMRGVYAIGDVTGEPMLAHRAMAQGEMVAEIIAGRKRAWDKRCIPAICFTDPEIVTAG
LSPDEARAQGYAIRVGQFPFSANGRAMTMLSEEGFIRVVARADTNLVLGLQAVGVGVSEL
SAGFALAIEMGARLEDLAGTIHAHPTRSEALQEAALKALGHALHA
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaaagagatcgtctgcaagcttctcgtcatcggcgctggacccggcggttatgtctgc
gccattcgagccgggcaactcggtctcgacaccgtcatcgtcgaggctgacaagccgggt
ggcacctgcctcaacgtcggatgcattccttccaaggccctcatccatgcggccgaggag
tttggtgctgccaagcagatgctgaccggcagaaacgcaatgggcatcggtatcgaggcc
gcgaccatcgacctcgccaagaccattgcctggaaggacggcatcgtcggccgcctgaac
agcggtgtctccgcgctgctgcagaaggcaagggtcaagatcgttcacggccgcgcggcc
ttccgcgacggtaagacggtcgaggtcgagaccgagacgggcatgcaggtcatccgcgcg
gagactgttgttatcgccacaggttctaagcccgtggaactttccgcccttcctttcggc
ggtcgggtgatctcgtccaccgaggcgctctcgctcggcgaagtgccgaagagactggtt
gtcgtcggaggcggttacattggcctcgaactcggtatcgcttttgccaagctgggctca
gaggtaacagtcgtcgaagccacccagcagatactgccgcaatatgatgccgacctggtg
cgacccgtcgcgcgccggcttggtgatctcggcattcgcaccctgacgggagcggaggca
aagagcctctcggacgacggcaatgcacttgtcgtcgagacatcgggcggacagcaacaa
ctgctgcctgccgaccgggtgcttgtcacggtcggtcggcggccgcgatcggcaggctca
ggtatcgaagagctcgatctcgatcgcagcgggccgtaccttcgcatcgatgatcgctgc
cgcacctccatgcggggcgtctatgcaatcggcgacgtcaccggtgaaccgatgctggcc
catcgcgccatggcgcagggagaaatggtcgccgagatcattgccggcaggaagcgcgcc
tgggacaaacgctgcattccggcgatctgctttaccgatccggaaatcgtgactgccggg
ctttcgccggacgaggcacgtgctcaaggctatgcgatccgcgtcggacaattcccgttc
agcgcaaatggccgggcgatgaccatgctgtcggaggagggcttcatacgcgtcgtcgcc
cgggccgataccaatctcgtccttggcctgcaggccgtaggcgtcggcgtttccgaactc
tcagcgggttttgcactggccatcgagatgggcgcgcggctggaggacctcgccggtacg
atccatgcgcatccgacgcgcagcgaggctctccaggaggctgccctcaaggcgctcggg
cacgcattgcacgcctga

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