Rhizobium favelukesii: LPU83_pLPU83d0734
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Entry
LPU83_pLPU83d0734 CDS
T03046
Symbol
gabD1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00250
Alanine, aspartate and glutamate metabolism
rhl00310
Lysine degradation
rhl00350
Tyrosine metabolism
rhl00650
Butanoate metabolism
rhl00760
Nicotinate and nicotinamide metabolism
rhl01100
Metabolic pathways
rhl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LPU83_pLPU83d0734 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LPU83_pLPU83d0734 (gabD1)
00310 Lysine degradation
LPU83_pLPU83d0734 (gabD1)
00350 Tyrosine metabolism
LPU83_pLPU83d0734 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LPU83_pLPU83d0734 (gabD1)
Enzymes [BR:
rhl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LPU83_pLPU83d0734 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LPU83_pLPU83d0734 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LPU83_pLPU83d0734 (gabD1)
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Motif
Pfam:
Aldedh
DUF1487
Motif
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All DBs
Position
pLPU83d:complement(736014..737471)
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AA seq
485 aa
AA seq
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MKTLNDTELFRQTGLIGGTWTGAASGGVVEVIDPATQTILGTVPDMGAAETRAAIEAADA
AFTPWKKKTHAERAGLLERWYALMIENLEDLALLLTLEQGKPLDEARGEIRYGAAFVKWF
AEEARRIGGHTIPSPTPDRRIVVLKEAVGVCAIVTPWNFPNAMITRKVAPALAAGCTVVI
KPSEFTPFSALALGVLAERAGIPAGVVNIVTGMPTAIGNEIMANVTVRKISFTGSTRVGS
LLMRGAADSIKRLSLELGGNAPFIVFDDADLDLAVEGAIASKFRNGGQTCVCANRILVQA
SVYDAFAEKLSARVRAMKVGPGTEPGVAIGPMINEAAITKINCHIDDALAKGAKIAASGR
SLPEGRQYTAPIVLTGATTEMLLAKEETFGPVAPLFRFETEDEAIRIANATPFGLAAYFY
TESLKRSWHVGEALEFGMVGLNTGAISTEVAPFGGVKQSGLGREGAQCGIEEYLEMKSFH
IGGLG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttgaacgacacggaactgttccggcaaacgggcctgataggcgggacgtgg
accggcgctgcctctggcggggtcgtggaggtgatcgacccggcgacccagacgatcctc
ggtaccgttccagatatgggggctgccgaaacgcgcgccgcgatcgaggctgccgatgca
gccttcacaccgtggaagaagaagacccatgccgaacgcgccggcctcctcgaacgctgg
tatgcgttaatgatcgaaaaccttgaggatctggcgctcctccttacgctggaacagggc
aaaccgctcgacgaagcgcgcggtgagatccgctatggcgccgccttcgtcaagtggttt
gcggaggaagcgagacgcatcggcggccataccattccctctccaacccccgaccgccgt
atcgtcgtgcttaaagaagcagtcggcgtctgcgccatcgtcacgccctggaatttcccg
aacgcgatgatcacccgcaaggtcgcgcctgccttggcggccggatgcaccgttgtgatc
aagccgtcggagttcacgccgttttccgcgctggcactcggtgtgcttgcggagcgggcg
ggcatcccggccggggtcgtcaacatcgtcactggcatgcccacggccattggcaacgag
atcatggccaatgtgacggtgcgcaagatttcgtttacgggctcgacacgcgtcggctcg
ctgctgatgcgcggtgcagccgatagcatcaaacggctttcactcgaactcggtggcaac
gccccgttcattgtcttcgatgatgccgatctcgatctcgcggtggaaggcgcgatcgcc
tccaagttccgcaacggaggtcagacttgcgtttgcgccaaccgcatcctggtccaggct
agcgtatacgacgccttcgccgaaaagctcagcgcccgagtgagggcgatgaaggtcggg
ccgggaaccgagccaggtgtggcaattggcccgatgatcaacgaggcggcgatcaccaag
atcaactgccatatcgacgatgcgcttgcgaaaggcgctaagatcgcggccagcggcaga
tcgctaccggagggccggcaatacaccgcccccatcgttctgaccggcgccacaacagag
atgctgcttgcgaaagaagagacctttggccctgtcgcgccgctgtttcgcttcgaaacc
gaggacgaagcgatcaggattgccaatgccacgcccttcggtctggccgcctatttctac
accgagagcctcaagcgctcctggcatgtcggcgaagcgctcgagttcggcatggtcggg
ctgaacaccggggcaatttcgaccgaggttgcccccttcggcggcgtgaaacaatccggt
cttggtcgtgaaggcgcccaatgcggcatcgaggaatatctcgaaatgaagagcttccat
atcggcggacttggctga
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