Rhizobium favelukesii: LPU83_pLPU83d1234
Help
Entry
LPU83_pLPU83d1234 CDS
T03046
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPU83_pLPU83d1234 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_pLPU83d1234 (exoA)
Enzymes [BR:
rhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LPU83_pLPU83d1234 (exoA)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LPU83_pLPU83d1234 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_31
Motif
LinkDB
All DBs
Position
pLPU83d:complement(1232309..1233100)
Genome browser
AA seq
263 aa
AA seq
DB search
MKIATYNVNGINGRLTVLLRWLKEDRPDIVCLQELKTVDERFPRKELRRVGYEAVWHGQK
SWNGVAILAKGTLPLLTRRGLPGDPDDTHSRYIEAVVDGLLIGCLYLPNGNPAPGPKFDY
KLRWFQRLQAYAAELLELEVPALLIGDYNVMPTDLDVYAPERWRDDALFRPEVRAAYAEL
VGQGWVDAVRHLYPEERIYTFWKYWRNSFERDAGLRIDHVLLSPAVAPCLRSASVRRRPR
GWEHTSDHAPLMVELDLPKAAGQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatagccacttataacgtcaacggtatcaacggccgcctaacagtactgctgcgg
tggctgaaggaagaccgccccgacattgtctgccttcaggaactcaagaccgtcgacgag
agatttccgcgcaaagaacttcgacgcgttggatatgaggctgtatggcacggccagaag
agctggaacggcgttgccatcctggcaaagggcacgctgccactcttgacgcggcgcggc
ctccccggcgatcctgacgacacgcacagtcgttatatcgaggctgttgtggacggcctg
ttgatcggctgcctctatcttccgaacggcaatcctgctccaggcccaaagttcgactac
aagcttcgatggtttcaacgcctgcaggcctatgcggccgaactgcttgagctcgaagtg
cctgctctgctgatcggcgactataatgtcatgccgactgatctcgatgtttacgctccg
gagcgttggcgagacgatgccctgtttcgccccgaggtccgggcagcctatgccgagctc
gtcgggcaagggtgggtggatgcggtacggcacttataccctgaggagcgaatatatacg
ttctggaagtattggcggaattcattcgagcgcgacgcgggtctgaggatcgaccatgtt
ctgctcagtcctgctgtcgctccgtgcctgcgctcagcaagtgtcaggcggcgacctcgt
gggtgggagcacaccagcgaccatgctccgttgatggtcgaactcgacctgccgaaggca
gccggccaatga
DBGET
integrated database retrieval system
