Rhizobium favelukesii: LPU83_pLPU83d1610
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Entry
LPU83_pLPU83d1610 CDS
T03046
Name
(GenBank) phage SPO1 DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPU83_pLPU83d1610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_pLPU83d1610
Enzymes [BR:
rhl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LPU83_pLPU83d1610
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPU83_pLPU83d1610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
LinkDB
All DBs
Position
pLPU83d:1612981..1613619
Genome browser
AA seq
212 aa
AA seq
DB search
MAELLGPTLAQPGALGTNLGEIHREATTCRRCNLYKHATQLVFGEGPTSAKVVFVGEQPG
DKEDLAGQPFVGPAGKLLDRCLEEAGIERDACYVTNAVKHFKFEPRGKRRIHAKPTRGEV
QICAWWLAAELRLIRPKLVVALGATAVYSLLGPQAKVTRDRGSVLRSPAGLYVFVTIHPS
ALLRMLDQPAGRQSRARFVDDLKAVATLLEHA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactgctcggcccgacattggcgcaaccaggtgcattgggtacgaatctgggc
gagattcatcgggaagcaacgacctgcaggcgatgcaacctctacaaacacgcaacgcag
ttggtgtttggggaaggtccgaccagtgccaaagttgtcttcgttggcgagcagccggga
gacaaggaggatcttgccgggcaaccgttcgttggccccgcgggaaagctgctggatcgc
tgtctcgaggaagcgggtatcgaacgcgatgcctgttacgtcaccaatgccgtaaagcac
ttcaagttcgaacctcgcggcaaacgacgcatccacgccaaaccgaccaggggagaggtt
cagatctgcgcgtggtggctggcagcagaattgcgcctcatacggccgaaactcgtcgtg
gcgctcggtgcgacggcggtctattccttgctcgggccacaagcaaaggtcactcgcgac
cgaggctccgtccttcgttcgccggccggattgtatgtgtttgtcacgatacatccctcg
gcgctgctgcgaatgctcgaccagccggccggtcggcaaagcagagcgcgcttcgtcgat
gacctgaaagctgtcgccacgcttcttgagcatgcatag
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