KEGG   Rhizobium favelukesii: LPU83_pLPU83d1773
Entry
LPU83_pLPU83d1773 CDS       T03046                                 
Name
(GenBank) transcription regulator with HTH domain
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
rhl  Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:rhl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhl03000]
    LPU83_pLPU83d1773
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhl02048]
    LPU83_pLPU83d1773
Transcription factors [BR:rhl03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    LPU83_pLPU83d1773
Prokaryotic defense system [BR:rhl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    LPU83_pLPU83d1773
SSDB
Motif
Pfam: HTH_3 DUF6589
LinkDB
Position
pLPU83d:complement(1754124..1754570)
AA seq 148 aa
MRNTTKENGRVSPMNALVKLVSEHWTHVAPLLAMPTNEAEYDHLVEQLDEILAEVGDDED
HPLALLASRMGDLIEAYDEQTRPMPHVTGADALRYIMEERSLGQSEVPEVGAQSVVSEIL
RGKRQINVRQARALSERFLIPATVFLSL
NT seq 447 nt   +upstreamnt  +downstreamnt
atgcggaatacgacaaaggaaaatggaagggttagcccgatgaacgcacttgtaaaactg
gtaagcgagcactggacgcatgtggcccctcttcttgccatgccgaccaacgaagctgag
tatgatcatctcgtggagcaacttgacgagatcctggctgaagtaggcgacgatgaggat
catcctttggcgttgcttgcatctcgcatgggggaccttatcgaggcctatgacgagcaa
acccgcccaatgcctcacgtaaccggtgctgatgcactccgttacatcatggaagagcgg
agtcttggccagtccgaggtgccagaagtaggcgctcagtccgtcgtgtctgagattcta
agaggaaaaagacaaatcaacgttcgacaagctcgtgcgctgagtgagcgatttttgata
ccagcgacagtatttctatcgctttga

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