Rhizobium favelukesii: LPU83_pLPU83d1915
Help
Entry
LPU83_pLPU83d1915 CDS
T03046
Name
(GenBank) ABC-type uncharacterized transport system, periplasmic component
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhl
Rhizobium favelukesii
Pathway
rhl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPU83_pLPU83d1915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhl02000
]
LPU83_pLPU83d1915
Transporters [BR:
rhl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LPU83_pLPU83d1915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
TAT_signal
Motif
LinkDB
All DBs
Position
pLPU83d:complement(1903737..1904912)
Genome browser
AA seq
391 aa
AA seq
DB search
MKVTRRTFVGTAAGAAVATMLPLRAFAQAKKPASPVTITIADVAGNLALTQGMFEAYASE
KADWVSSFAFTKAPAPELPGKIKAQQAAGKVDIDLVLTGTDALSAGLDQGLWIDLKAHKS
ELPNLEQILQPQAFKMQSLAKDQGVVITYYPSGPLIEYMPDKVPTPPKSAQELLEWAKAN
KNRFIYARPANSGPGRTFLMGLPYLLGDSDPRDPAKGWAKTWDYLAALGEHIEYYPTGTG
QVMKELGEGTRDIVVSTTGWDINPRALGIVPAEAKVQKLDGFHWVTDAHYAVVPKGVSDE
KIGVLIDVLNYILQPKQQAIAYDAGYFYPGPAVKDVTLEMAPQESQDTIKEFGRPEYADW
IANNPLEVPLEPKQLVEAFRIWDEKIGAKKG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacccgcagaacattcgtcggcaccgcagcgggcgctgctgttgcaaccatg
ctgccgctgagggcgtttgcgcaggccaagaaaccggcaagccccgtcaccatcacgatt
gcagatgtcgccggcaacctggcgctgacgcagggcatgttcgaggcctacgcctcggaa
aaggcggactgggtttccagcttcgccttcacaaaggcaccggcaccagaactgcctggc
aagatcaaggcgcagcaggcggccggcaaagtcgatatcgatctcgtcctgacgggaacg
gacgcgctttcggcgggccttgatcagggactttggatcgatctgaaggcacacaagtcg
gagctgcccaacctcgagcagatcctgcagccgcaggccttcaagatgcagtcccttgcc
aaggatcagggcgtcgtcatcacctattatccctcaggcccactcatcgaatatatgcct
gacaaggtacccacgccgccgaaatcggcgcaagaactgcttgaatgggcgaaggcaaac
aagaaccgcttcatctatgctcggccggccaattcgggccctggccgcaccttcctcatg
ggcttgccatacctgcttggcgacagtgatcctcgcgatcccgccaagggctgggcaaaa
acgtgggactatctcgccgcacttggcgagcacattgagtattatccgacgggcactggc
caggtgatgaaggagcttggcgaggggacgcgcgacatcgtcgtatcgacgaccggctgg
gacatcaatccgcgggcactcggcattgttccagccgaggcgaaggtgcaaaagctcgac
ggcttccattgggtcacggacgcccactacgcggtcgtcccgaaaggcgtctcggacgag
aagatcggcgtgctgatcgacgtgcttaactacatcctgcagcccaaacagcaggcgatc
gcctacgatgccggctatttctatccgggtccggccgtgaaggacgtcaccctcgagatg
gcgccgcaggaaagccaggacacgatcaaggagttcggccgtcccgaatatgccgactgg
attgccaacaatccgctggaggttccgctggagccgaaacaactggtcgaagccttccgc
atctgggacgagaagatcggcgccaagaagggctga
DBGET
integrated database retrieval system
