Rhodovulum sp. MB263: B5V46_02395
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Entry
B5V46_02395 CDS
T04771
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhm
Rhodovulum sp. MB263
Pathway
rhm03030
DNA replication
rhm03430
Mismatch repair
rhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5V46_02395
03430 Mismatch repair
B5V46_02395
03440 Homologous recombination
B5V46_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhm03032
]
B5V46_02395
03400 DNA repair and recombination proteins [BR:
rhm03400
]
B5V46_02395
Enzymes [BR:
rhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5V46_02395
DNA replication proteins [BR:
rhm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5V46_02395
DNA repair and recombination proteins [BR:
rhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5V46_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
PAS_9
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
ARC87553
LinkDB
All DBs
Position
477633..479702
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AA seq
689 aa
AA seq
DB search
MHERLNERLGLRLRFALFFAALALGGMAVLVLGLWFGHARAGGPADGYVIAGMVAGCGLL
GLAAWIGLLFDANVVRPIQALAADLQTRARVDVAADIDEAPARYLGALAPAANAIHDALA
ATREAQDRAVAERTAALNREKAMFEALLRDLAEGVVVATPDHRVMLYNRAALGLLGDLGL
DRPLTALLRPEPLTHALDRMGARAARGEVEAERFLAATASGERFLMARVSPVAVAGQRAG
YVLIFHDATEDLEAHAELDHLFNTMLEGIRRPTAAIGALSDAIEADPEMADEMRAAFFAR
LRGEQAMLVDRMNQLADRYGTATTRRWPMPAVASDDIFDALTARLPGDLRFEGARQFIRC
DGFAISELLARVIEGLRTDGRRDGFVLRAVPEAREVCLELHWRGPPVGDGQIDRWLSAPL
SAGYGEYLGRDALESHGTELWAEPTETGHRLLLPLTAATAPLLTPADPRPEFYDFSLPPP
AAGALADRPLAELRFVVFDTETTGLAPRQGDEIVQIAGVRIVNGRILRGEVFDSLVNPGR
HIPAASTAVHGIDDAMVRGGPDVVAAGRRFHAFCEGAVLVAHNAAFDMTFLKMKEDRLGL
RFDHPVLCTVLLSAALYPHAEDHTLDALAARFGVRLEARNRHTALGDAMATAEVFRQMLG
MLEVAGVRTLGEAMARSNEMHRLRRAQSY
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcgactgaatgagcgactggggctgagacttcgtttcgcgctgttcttcgcg
gcgctggcactgggcggcatggcggtgctggtgctggggctctggttcggccatgcccgc
gcgggcggtccggccgacggctatgtgatcgcggggatggtggcgggctgcgggctgctg
gggcttgcggcctggatcgggcttttgttcgacgcgaatgtggtgcggccgatccaggcg
ctggccgccgatctgcagacccgggcccgggtcgatgtcgcggccgatatcgacgaggcg
cccgcgcgctatctgggcgcgctcgcccccgccgccaatgcgatccatgacgcgctggcc
gccacccgcgaggcccaggaccgggccgtggccgagcggaccgccgcgctgaaccgcgaa
aaggcgatgttcgaggcgctgttgcgcgatctggccgaaggggtggtcgtggccacgccc
gatcaccgggtcatgctgtataaccgcgccgcgctcgggcttctgggcgatctggggctc
gaccggccgctgaccgcccttctaaggcccgagccgctgacccatgcgctcgaccggatg
ggagcgcgggccgcccgcggcgaggtcgaggcggaacggttcctggccgccaccgccagc
ggcgagcgcttcctgatggcgcgggtcagcccggtcgcggtcgcgggccagcgcgcgggc
tatgtgctgatcttccacgatgcgaccgaggacctcgaggcgcatgccgagctcgaccat
ctgttcaacaccatgctcgaggggataaggcggccgaccgccgccatcggtgcgctgtcc
gatgccatcgaagccgatcccgagatggctgacgagatgcgcgcggccttctttgcccgg
ctccgcggcgaacaggcgatgctggtcgaccggatgaaccagctcgccgaccgctacggc
accgccaccacccggcgctggccgatgcccgccgtcgcctcggacgacatcttcgatgcg
ctgaccgcgcggctgcccggagatctgcgtttcgagggcgcgcgtcagttcatccgctgc
gacggcttcgcgatttccgagcttctggcccgagtgatcgaggggctgcgcaccgatggc
cggcgcgacggtttcgtcctgcgcgctgtgcccgaggctcgcgaggtctgccttgagctg
cactggcgcggtccgccggtcggcgacgggcagattgaccgctggctctcggcgccgctc
tcggcgggctatggcgaatatctcggccgcgacgcgctcgagagccatggcaccgagctt
tgggcggagccgaccgagaccggccaccgtctgctgctgccgctgaccgctgccacggca
ccgctgctgacgccggccgatccgcgtccggaattctacgacttctcgctgccgccgccc
gccgcaggcgcgctggccgaccggccgctcgccgagctgcgcttcgtcgtcttcgacacc
gagaccaccggccttgcgccgcggcagggcgacgagatcgtgcagatcgccggggtccgg
atcgtcaatggccgcatcctgcgcggcgaggtcttcgacagcctggtcaatccggggcgg
catattccggcggcctcgacggcggttcatggcatcgacgacgcgatggtgcggggcggg
cccgacgtggtcgcggcggggcggcggtttcacgccttttgcgagggggctgttctggtc
gcccataacgccgccttcgacatgaccttcctgaagatgaaggaggaccggctggggctt
cgcttcgaccatccggtgttgtgcaccgtgcttctgtcggcggcgctctatccgcatgcc
gaggatcataccctcgatgcgctggcggcccgtttcggggtgcggctcgaggcccggaac
cgccataccgcgctgggcgatgcgatggcgacggccgaggtgttccgccagatgctggga
atgctggaggttgcgggggtgcggacgctgggcgaggcgatggcgcggtccaacgagatg
caccgcctccgccgcgcccagagctactga
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