Rhodovulum sp. MB263: B5V46_03610
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Entry
B5V46_03610 CDS
T04771
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhm
Rhodovulum sp. MB263
Pathway
rhm03410
Base excision repair
rhm03430
Mismatch repair
rhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5V46_03610
03430 Mismatch repair
B5V46_03610
03440 Homologous recombination
B5V46_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhm03400
]
B5V46_03610
DNA repair and recombination proteins [BR:
rhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B5V46_03610
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B5V46_03610
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B5V46_03610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Prok-RING_1
Tom5
Motif
Other DBs
NCBI-ProteinID:
ARC87769
UniProt:
A0A1V0HV09
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Position
complement(747483..749231)
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AA seq
582 aa
AA seq
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MTRAYLGVEASATGRRWVGPSEEEMRQAEALAQSTLLPPAVAAVLARREVTADTAAAFLD
PTLKELLPDPRALRDMGRAAERVIAALTGRQRIAVFADYDVDGGASAALLLDWLQAMGHR
ATLYIPDRIDEGYGPNVPAMQALARDHDLIVCVDCGTLSHDAIAAAAGADVVVLDHHLGA
ETLPPALAVVNPNRQDEDGSLGHLCAAGVVFLLLVELNRQMRDAGMRGPDLLQSLDLVAL
ATVADVAPLVGVNRALVRQGLKIMARRQRPGLVALSDVARMDSAPKPYHLGFLLGPRVNA
GGRIGQADLGARLLATADPDEAAALAERLDQLNTERREIEAGVRAAALAQAEERGTDGPL
VWAAGEGWHPGVVGIVASRLKEATNRPALVIGFDGDEGKGSGRSVSGVDLGAAIQRLASE
GLLVKGGGHRMAAGLTVARDRLEPAMARLGELLARQGAGRMGPADLRLDALLMPGAATVE
LIDEIERAGPFGAGAPAPRFAFPDCAILHVRRVGDAHLKLSFGDGLGARLDAIAFGAFDG
PLGPLIEAHGGARFHLAGRLEINSWNGRQSVQLRLEDAAPAA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgcatatctcggggtcgaggcttcggccaccgggcggcgctgggtcggcccc
tcggaggaagagatgcgccaggccgaggctctggcgcaatccaccctgttgccccccgcc
gtcgccgccgtgctggcccgccgggaggtgacggcagacacagccgccgctttcctcgac
cccaccctcaaggagttgctgcccgacccgcgcgcgctgcgcgacatggggcgggcggcc
gaacgcgtcatcgcggcgctgaccgggcgccagcggatcgcggtctttgccgattacgat
gtcgatggcggcgcctcggcggcgctgctgctggactggctgcaggccatggggcaccgc
gccacgctttatatccccgaccgtatcgacgagggctacggccccaacgtgcccgcgatg
caggccctggcccgcgaccatgacctgatcgtctgcgtcgattgcggcaccctcagccat
gacgccatcgccgcggcggctggcgccgatgtggtcgtgctggaccaccacctgggcgcc
gagaccctgccgcccgcgctggccgtggtgaaccccaaccggcaggacgaggatggcagc
ctcggccatctctgcgcggcgggcgtcgtgttcctgctgctggtagagctgaaccggcag
atgcgcgacgccgggatgcgcggccccgacctgctgcaatcgctcgatctggtggcgctg
gcgaccgtggccgatgtggcgccgctggtcggggtcaatcgcgcgctggtgcgccagggg
ctgaagatcatggcccggcgccagcgccccgggctggtggcgctgtccgacgtggcgcgg
atggacagcgcgcccaagccctaccatctgggcttcctgctcggaccccgtgtcaatgcc
ggcggtcggatcggacaggccgatctgggcgcgcggctgctggccaccgccgatccggac
gaggccgccgcgctggccgaacggctcgaccagctcaacaccgagcgccgcgagatcgag
gccggcgtgcgtgccgcagcccttgcgcaggccgaggagagaggcaccgacggtccgctg
gtctgggccgcgggcgagggctggcacccgggcgtcgtcggcatcgtcgcgagccgcctg
aaggaggccaccaaccgccccgccctggtgatcggcttcgatggcgacgagggcaagggc
tccggccgctcggtctcgggcgtcgatctgggcgcggcgatccagcggctggcctccgag
gggcttctggtgaagggcggcggccaccgcatggctgctgggctgaccgtcgcgcgcgac
cggctcgagcccgccatggcgcggcttggcgagcttttggcccggcagggcgcgggcagg
atggggccggccgatctgcggctcgacgcgctgttgatgccgggcgcggccacggtcgag
ttgatcgacgagatcgagcgcgcgggccccttcggcgcgggcgcccccgccccccgcttc
gcctttcccgactgcgccatcctgcatgtccgccgggtcggcgacgcccatctcaagctg
agcttcggcgacggtctcggcgcgcgtctcgatgccatcgccttcggtgccttcgacggc
ccgctcggcccgctgatcgaggcccatggcggcgcccgcttccaccttgccggccgtctg
gagatcaattcctggaacggacggcagtcggtccagctgcgtctggaggatgcggccccg
gccgcctga
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