Rhodovulum sp. MB263: B5V46_08435
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Entry
B5V46_08435 CDS
T04771
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhm
Rhodovulum sp. MB263
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhm03032
]
B5V46_08435
03400 DNA repair and recombination proteins [BR:
rhm03400
]
B5V46_08435
Enzymes [BR:
rhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B5V46_08435
DNA replication proteins [BR:
rhm03032
]
Prokaryotic type
DNA Topoisomerases
B5V46_08435
DNA repair and recombination proteins [BR:
rhm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B5V46_08435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ARC88642
LinkDB
All DBs
Position
complement(1794945..1797719)
Genome browser
AA seq
924 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDPEQGFEMTWEVGSDSKK
HVKAIADALKEDNALILATDPDREGEAISWHLEETLRARRAIKKDTAVSRVVFNAITKSA
VTEAMKNPRTVDEPLVHAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVE
REMEIEAFRAREYWTVSAQFATPRGQIYEARLITLGGQKLDKFDLGTATDAELAVRAVES
REFTVAAVEAKPGTRNPAPPFMTSTLQQEASRKFGFGARQTMQAAQRLYEAGIITYMRTD
GIDMAPEAVMAARDAIKDRYGADYVPKSPRMYKNKAKNAQEAHECIRPTEMTRDPSKLRV
TDEDQRKLYDLIWKRTIASQMEAARLERTTVDVESADREVVLRATGQVVLFDGFLKVYEE
GRDDTEDGDDRRLPQIAQGEPARPASADRFAADYATLAGTGSAARDPELIEAPAEDRVLR
CDRAILDAGKAILAQQHFTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDRGYVLK
DKNRLIPEDKGRLVTAFLSNYFSRYVGYEFTANLEDELDDVSAGERAYLDVLSRFWKDFS
AAIAETADLRISEVLDKIDDVLAPHLYPPREDGSDPRICPKCGAGRLNLKTARSGGAFIG
CSNYPECRYTRSLSAVNGDDGSELDGKVLGHDGEDEISLRIGRFGPYVQRGEATEEVPKP
PRASLPKGWKPEEIDLEKALMLLSLPREIGPHPEDGETVEAGIGRYGPFVKHGRKYANLP
DVEEVFTIGMNRAVEVLAQKKTRGGATAAKPLRQLGEHPEKGGAIDVMAGRYGPYVKWEK
VNATLPKDVEPEGVTLEQAVELIDAKAAKGGKTKAKAKAKPAAAKTAKTTGKTAAKSTAK
TAGTKAKTTKAAKTTKAKTPDQSE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgttgtcgagtccccggccaaagccaagacaatcaacaagtatctgggc
tccgactacacggttctcgcctcttatggccatgtgcgcgacctgcccccgaaagacgga
tcggtcgatcccgagcagggattcgagatgacctgggaggtcggctcggacagcaagaag
catgtgaaggccatcgccgacgcgctgaaagaggacaatgcgctgatcctcgccaccgac
cccgatcgcgagggcgaggcgatttcctggcatctggaagagacattgcgcgcccgccgc
gcgatcaagaaggacaccgccgtcagccgggtcgtcttcaacgccatcaccaaatcggcg
gtgaccgaggcgatgaagaacccgcgcaccgtcgacgagcccctcgtccatgcctatctg
gcgcgccgggcgcttgactatctggtgggcttcaacctgtcgccggtcctgtggcgcaag
ctgccgggcgcgaaatcggcgggccgggtgcagtcggtctgcctgcggcttatcgtcgag
cgcgagatggagatcgaggccttccgcgcccgcgaatactggacggtctcggcccagttc
gcgacgccgcgcggccagatctacgaggcgcggctgatcacgctgggcggccagaagctc
gacaagttcgacctgggcaccgcgaccgatgccgagctggcggtcagggccgtcgaaagc
cgcgagttcaccgtcgccgccgtcgaggccaagcccggtacccgcaaccccgcgccgccc
ttcatgacctcgaccctgcagcaggaagccagccgcaagttcggcttcggcgcgcgccag
accatgcaggcggcacaacgcctctatgaggcgggcatcatcacctacatgcggaccgac
ggcatcgacatggcccccgaggcggtgatggccgcgcgcgacgcgatcaaggaccgctac
ggcgcggattacgttccgaaatcgccgcggatgtacaagaacaaggccaagaacgcgcag
gaagcgcatgaatgtatccggccgaccgagatgacccgcgatccgtccaagctgcgggtg
accgacgaggatcagcgcaagctctatgacctgatctggaagcgcaccatcgccagccag
atggaggccgcgcggctggaacgcaccaccgtcgatgtcgaaagcgcggatcgcgaggtg
gtgctgcgcgccaccggccaggtcgtgctcttcgatgggtttctcaaggtctacgaagag
ggccgagacgataccgaggatggcgacgacaggcgcctgccgcagatagcgcagggcgaa
cccgcccggcccgcatcggccgaccgcttcgccgccgattacgcgacgcttgccgggacc
ggcagcgccgcccgcgaccccgagctgatcgaggcccccgcagaggaccgggtgcttcgc
tgcgatcgggcaatcctcgatgcaggcaaggcgatcctcgcccagcagcatttcacccag
ccgccgccgcgctataccgaggccacgctggtcaagcgtatggaagagctcggcatcggc
cggccctcgacctatgcctcgatcgtcaccacgatccaggatcgcggctatgtgctgaag
gacaagaaccggctgatccccgaggacaaggggcggctggtgacggccttcctgtcgaat
tatttcagccgctatgtgggctacgagttcaccgccaatctggaggacgagcttgacgac
gtctcggcgggcgagcgcgcctatctcgacgtgctcagccggttctggaaggatttctcg
gccgccatcgccgaaaccgccgatctgcggatttccgaggtcctcgacaagatcgatgac
gtgctggcgccgcatctctacccgccgcgcgaggacggctccgacccgcgcatctgcccc
aaatgcggggcgggccggctgaacctcaagaccgcgcgctcgggcggggccttcatcggc
tgctcgaactaccccgaatgccgctatacccgctcgctctcggcggtgaatggcgatgac
ggctccgagctcgacggcaaggtgctgggccatgacggcgaggacgagatcagcctgcgc
atcggccgtttcggcccctatgtgcagcgcggcgaggccaccgaagaggtgccgaaaccg
ccgcgggccagcctgcccaagggctggaagcccgaggagatcgacctcgagaaggcgctg
atgctcctgagcctgccgcgcgagatcgggccgcatcccgaggatggcgagaccgtcgag
gccgggatcgggcgctatgggcccttcgtcaagcatggccggaaatacgccaacctgccc
gatgtcgaggaggtcttcaccatcggcatgaaccgcgcggtcgaggtgctggcccagaag
aagacccgcggcggcgccacggccgcgaaaccgctgcgccagcttggcgagcatcccgag
aagggcggcgccatcgacgtcatggccggacgctacggaccctatgtgaaatgggagaag
gtcaacgcgaccctgcccaaggatgtggagcccgagggcgtgacgctggaacaggcggtc
gagctgatcgacgccaaggcggccaagggtggcaagaccaaggccaaggcaaaggcgaaa
cccgctgccgccaagaccgcgaagacgaccggaaaaaccgccgcgaaatcgacggcaaag
acggccgggaccaaggcaaagaccacgaaagcggcgaagacgacaaaggcgaagacgccg
gaccagtcagaatag
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