Rhodovulum sp. MB263: B5V46_12115
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Entry
B5V46_12115 CDS
T04771
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhm
Rhodovulum sp. MB263
Pathway
rhm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5V46_12115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhm03400
]
B5V46_12115
Enzymes [BR:
rhm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B5V46_12115
DNA repair and recombination proteins [BR:
rhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B5V46_12115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARC89301
UniProt:
A0A1V0HZF1
LinkDB
All DBs
Position
complement(2591159..2591953)
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AA seq
264 aa
AA seq
DB search
MDPALTPHEALALLAWQVDLGATEAICDAPVNRYEAPRPAPAATPAAARPVASAPRPPAR
PAPVDPVAVARAAADAATDREGLAAAMAAYELCELKKGARNLVFSDGNPKARVMVIGEAP
GREEDLQGKPFVGRAGHLLDQMFGYIGLGRNDPAADRALYITNVLPWRPPQNRDPEAGEV
AMMLPFLERHVALADPDILVLMGNHSCGALLGRKGITRLRGHWVEALGRPALPMFHPAYL
LRTQLAKRDAWHDLLMLQTRLRGG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgcactgaccccgcatgaggcgctggcgcttctggcctggcaggtcgatctc
ggcgcgaccgaggcgatctgcgacgcccccgtgaaccgttacgaggcgccgcgccctgct
ccggcggcgactccggcggcggcgcgtcctgtcgcgtccgcgccccggccgcccgcccgg
cccgcgccggtcgatccggtggcggtggcgcgcgcggcggcggacgcggccaccgatcgc
gaggggctggcggcggcgatggcggcctatgagctctgcgagctgaagaagggcgcgcgg
aatctcgtcttttccgatggcaacccgaaggcgcgggtgatggtgattggcgaggcgccg
ggccgcgaggaagacctgcagggcaagcccttcgtcggccgcgccgggcatctgctcgat
cagatgttcgggtatatcgggctggggcggaacgatccggcggccgatcgcgcgctctac
atcaccaatgtcctgccatggcggccgccgcagaaccgcgaccccgaagccggcgaggtc
gcgatgatgctgcccttcctcgagcgccatgtggcgcttgccgatcccgacatcctggtc
ctgatgggcaaccattcctgcggtgcgcttctgggccggaagggcatcacccggctgcgc
ggccactgggtcgaggcgctgggccggcctgcgttgccgatgttccacccggcctatctg
ctgcgcacccagctggccaagcgcgatgcctggcacgatctgctgatgctgcagacgcgg
ttgagggggggctga
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