Rhodovulum sp. MB263: B5V46_13380
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Entry
B5V46_13380 CDS
T04771
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhm
Rhodovulum sp. MB263
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhm03032
]
B5V46_13380
03036 Chromosome and associated proteins [BR:
rhm03036
]
B5V46_13380
03400 DNA repair and recombination proteins [BR:
rhm03400
]
B5V46_13380
DNA replication proteins [BR:
rhm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B5V46_13380
Chromosome and associated proteins [BR:
rhm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
B5V46_13380
DNA repair and recombination proteins [BR:
rhm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
B5V46_13380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
ARC89525
UniProt:
A0A1V0I023
LinkDB
All DBs
Position
complement(2865101..2865382)
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AA seq
93 aa
AA seq
DB search
MIRSELIQKIAEENPHLYQRDVERIVNTIFEEVISAMARGDRVELRGFGAFSVKKRDSRT
GRNPRTGESVQVDEKCVPFFKTGKLLRDRLNDK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttcggaattgatccagaaaattgcagaagagaacccgcatctttaccagcgg
gacgtcgagcgaattgtgaataccatctttgaagaggtcatctcggccatggcgcgggga
gacagggtggagcttcgcggtttcggtgcgttctcggtcaagaagcgtgactcgcggacc
gggcgaaatccgcgcaccggcgagtctgtgcaggttgacgagaaatgcgtgcctttcttc
aagaccggcaagctgctacgtgatcggcttaacgacaaataa
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