Rhodovulum sp. MB263: B5V46_17625
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Entry
B5V46_17625 CDS
T04771
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhm
Rhodovulum sp. MB263
Pathway
rhm00300
Lysine biosynthesis
rhm00470
D-Amino acid metabolism
rhm01100
Metabolic pathways
rhm01110
Biosynthesis of secondary metabolites
rhm01120
Microbial metabolism in diverse environments
rhm01230
Biosynthesis of amino acids
Module
rhm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5V46_17625
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B5V46_17625
Enzymes [BR:
rhm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
B5V46_17625
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ARC90608
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All DBs
Position
complement(3769616..3770446)
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AA seq
276 aa
AA seq
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MDDTERLPFMKMHGLGNDFVVIDRRQGGTPLSASLVAAIADRHRGVGFDQLAVIEPAEDA
DARLVFYNADGSLSATCGNATRCIARHLIDRTGRRELTLVTERGRLSARDAGGGLTSVNM
GPPILDWQGVPLAREVDLDRLPIAGAPVATGMGNPHCTFFVEDAEAVDLAAFGPEHEHHP
LFPERTNVQVAHLAGPDRIRMRVWERGTGLTLASGSSSCAVAVAAARRGLTGRSVTILLD
GGELQIDWREDGVWMTGPTAHVFDGVFTGPFLAGAE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaccgaacgcctgcccttcatgaagatgcacgggctgggcaacgacttcgtc
gtgatcgaccggcggcagggcggcacgcccctgtccgccagccttgttgcggccatcgcc
gaccggcaccggggcgtcggattcgaccagctggcggtgatcgagcctgctgaggatgcc
gatgcgcggctggtcttctacaatgcggatgggtcgctgtcggccacctgcggcaatgcg
acccgctgtatcgcgcgccatctgatcgaccggaccggacggcgcgagctgacgcttgtc
accgaacgcgggcggctttcggcgcgcgatgcgggcggtgggctgacctcggtcaatatg
gggccgccgattctcgactggcagggcgtgccgctggcgcgcgaggtcgatctcgaccgc
ctgccgatcgcgggcgcgccggtggcgaccgggatgggcaatccgcattgcaccttcttc
gtcgaggatgccgaggcggtcgatctggccgccttcggtcccgagcacgaacatcacccg
ctgtttcccgagcgcaccaatgtgcaggtcgcgcatctggccgggccggaccggatccgg
atgcgggtctgggagcgtggcacagggctgacgctggcctcgggttcgtcctcctgcgcg
gttgcggtcgcggccgcgcggcgcgggctgaccgggcgctcggtgaccatcctgctcgat
ggcggcgaattgcagatcgactggcgcgaggacggggtctggatgaccgggccgaccgcg
catgtgttcgacggggtcttcaccggcccgttcctggcgggggccgagtga
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