Rhodococcus sp. M8: ISO16_01060
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Entry
ISO16_01060 CDS
T11421
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm02024
Quorum sensing
rhmm03060
Protein export
rhmm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ISO16_01060 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ISO16_01060 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ISO16_01060 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhmm02044
]
ISO16_01060 (ffh)
Enzymes [BR:
rhmm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ISO16_01060 (ffh)
Secretion system [BR:
rhmm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ISO16_01060 (ffh)
Eukaryotic Sec-SRP protein
ISO16_01060 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
APS_kinase
ArsA_ATPase
Zeta_toxin
AAA_31
AAA_16
MeaB
AAA_22
AAA_18
NPHP3_N
cobW
AAA_33
Thymidylate_kin
NTPase_1
TctA
ATP_bind_1
MobB
NACHT
YdhS_M
6PF2K
TsaE
AAA_30
CLP1_P
KAP_NTPase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QPG45720
LinkDB
All DBs
Position
237936..239516
Genome browser
AA seq
526 aa
AA seq
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MFESLSDRLTGALKDLRGKGRLSDADIDATAREIRLALLEADVALPVVRSFIAKIKERAK
GAEVHGALNPAQQVVKIVNEELVGILGGETRRLQFAKTPPTVIMLAGLQGSGKTTLAGKL
AKWLKDQGHTPLLVACDLQRPGAVTQLQIVGERAGASVFAPHPGTSIGGGENPLGITAAD
PVNVARDGVAEARAKHYDVVIVDTAGRLGIDEELMAQAAGIRDAVQPDETLFVLDAMIGQ
DAVSTAEAFRAGVGFTGVVLTKLDGDARGGAALSVRELTGQPILFASTGEKLEDFDVFHP
ERMASRILGMGDVLTLIEQAEQVFDAEQAEATAAKIGSGELTLEDFLEQMMAVRKMGPIA
NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPAERANPKIINASRRLRIANGSGVK
VSDVNQLVDRFFEARKMMAAMAGRMGMPGSRKPQRAKKGKKGKKGGRGPTPPKIKGGFPG
GMPAGMPGMGGMPAGFPDLSKMPKGLDELPPGLENFDLSQLKLPKK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgaccggagccctcaaggacctgcgcggcaagggg
cgcctctccgacgccgacatcgacgcgaccgcccgggagatccgcctggcgctgctcgag
gccgacgtcgccctgcccgtggtgcgctcgttcatcgccaagatcaaggaacgagccaag
ggcgccgaggtacacggcgcgctgaaccccgcccagcaggtcgtcaagatcgtcaacgag
gagctcgtcgggatcctcggcggcgagacccggcggctgcagttcgccaagaccccgccc
acggtgatcatgctcgccggcctgcagggttccggtaagaccaccctcgccggcaagctc
gccaagtggctcaaggaccagggccacaccccgctgctggtcgcctgtgacctgcagcgg
cccggcgcggtcacccagctgcagatcgtcggtgaacgcgccggtgcgtccgtgttcgcc
ccgcaccccggcacctccatcggcggcggcgagaacccgctcggcatcaccgccgccgac
ccggtgaacgtcgcccgcgacggcgtcgccgaggcccgcgccaagcactacgacgtggtc
atcgtcgacaccgccggccgcctcggcatcgacgaggagctgatggcccaggccgccggc
atccgcgacgccgtgcagcccgacgagacgctgttcgtgctcgacgcgatgatcggccag
gacgccgtgagcaccgccgaggcgttccgcgccggtgtcggcttcaccggcgtggtgctc
accaagctcgacggcgacgcccgcggcggtgccgcgctcagcgtccgcgagctgaccggt
cagccgatcctgttcgcgtcgaccggtgagaagctcgaggacttcgacgtcttccacccc
gagcgcatggccagccgcatcctcggcatgggcgacgtgctcaccctcatcgagcaggcc
gagcaggtcttcgacgccgagcaggccgaggccaccgccgcgaagatcggctccggtgaa
ctcaccctcgaggacttcctcgagcagatgatggccgtacggaagatgggcccgatcgcg
aacctgctcggcatgttgccgggtgcgggacagatgaaggacgccctcgcgaacgtcgac
gagaagcagctcgaccggatccaggcgatcatccgtggcatgacgccggcggaacgcgcc
aacccgaagatcatcaacgcctcccggcggctgcgcatcgccaacggctccggcgtcaag
gtctccgacgtcaaccagctcgtcgaccggttcttcgaagcccgcaagatgatggccgcg
atggccgggcgcatgggcatgcccgggtcccgcaagccgcagcgcgcgaagaagggcaag
aagggcaagaagggcggccgcgggccgaccccgccgaagatcaagggcggattccccggt
ggcatgcccgccggcatgcccggcatgggcgggatgcccgccgggttcccggacctgtcg
aagatgccgaagggcctcgacgagctgccgcccggtctcgagaacttcgacctctcgcag
ctgaagttgccgaagaagtag
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