Rhodococcus sp. M8: ISO16_03045
Help
Entry
ISO16_03045 CDS
T11421
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ISO16_03045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_03045
DNA repair and recombination proteins [BR:
rhmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ISO16_03045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
SIMR_N
Motif
Other DBs
NCBI-ProteinID:
QPG46074
LinkDB
All DBs
Position
complement(657994..658971)
Genome browser
AA seq
325 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYSATESHDIRFHQVHAKDGGRIKYDRICTECGESVPYAEI
DKAYDSDEGVRVVLADEDFDKLPVAEKHEIPVLQFVPTEQIDPILFEKSYYLEPDSSSPK
AYTLLAETLTQTDRTALVHFTLRQRTRLAALRNRDGVLVLQTLLWPDEVRSVAFPVLDDA
EPPKQKELAMAEMLVESMADDFRPDEFTDEYQVELRSLIDDIIARGGEKVLPVTPAGEPA
AEDAEVLDLVAALQRSVDAAAAGDEPGAAAPARGAAAKKTPARKSAAKKTPAKKTTAEKP
TAKKTAAKKTTEKAPAKKSTARKRA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgatctggaagggttccatcgcgttcgggctggtgaacgtgccggtgaaggtg
tattcggccacggagagccacgacatccggttccaccaggtgcatgcgaaggacggcggg
cggatcaagtacgaccggatctgcaccgagtgcggcgagtcggtgccctacgccgagatc
gacaaggcctacgactccgacgagggcgtgcgggtggtgctcgccgacgaggacttcgac
aagctgcccgtcgcggagaaacacgagatcccggtgctgcagttcgtcccgaccgagcag
atcgacccgatcctgttcgagaagtcgtactacctcgagccggactcgtcgtcgccgaag
gcgtacacgctgctggccgagacgctcacgcagaccgatcgcaccgcactggtgcacttc
acgctgcggcagcgcacccggctggcggcgctgcgcaaccgcgacggcgtgctcgtgctg
cagaccctgctgtggccggacgaggtgcggtcggtggcgttcccggtgctcgacgacgcg
gagccgccgaagcagaaggaactggcgatggcggagatgctcgtcgagtcgatggccgac
gacttccgtccggacgagttcaccgacgagtaccaggtcgagctgcggtcgctgatcgac
gacatcatcgcccggggcggcgagaaggtgctgccggtgaccccggcgggggaacccgcc
gccgaggacgccgaggtgctggacctggtggctgcgctgcagcgcagcgtggacgccgcc
gcggccggcgacgagccgggcgcggccgcgcccgcccggggcgcggcggcgaagaagacg
cccgccaggaagagcgccgcgaagaagacgccggcgaagaagaccacggccgagaagccc
accgcgaagaagacggcggcgaagaagaccaccgagaaggcccccgcgaagaagtccacc
gcgcgcaagcgggcctga
DBGET
integrated database retrieval system