Rhodococcus sp. M8: ISO16_04360
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Entry
ISO16_04360 CDS
T11421
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03030
DNA replication
rhmm03410
Base excision repair
rhmm03420
Nucleotide excision repair
rhmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISO16_04360 (polA)
03410 Base excision repair
ISO16_04360 (polA)
03420 Nucleotide excision repair
ISO16_04360 (polA)
03440 Homologous recombination
ISO16_04360 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhmm03032
]
ISO16_04360 (polA)
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_04360 (polA)
Enzymes [BR:
rhmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISO16_04360 (polA)
DNA replication proteins [BR:
rhmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ISO16_04360 (polA)
DNA repair and recombination proteins [BR:
rhmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ISO16_04360 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ISO16_04360 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPG46301
LinkDB
All DBs
Position
complement(982216..984939)
Genome browser
AA seq
907 aa
AA seq
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MTRASTSSAPAASGGDRPTLLLLDGHSLAFRAYYALPAENFKTHSGQTTNAVYGFTSMLI
NLLRDEQPTHVAAAFDVNRDTFRATAYPEYKANRSSAPDEFRGQIDITKDVLEALGIPVM
AEAGFEADDIIATLATQATAQGYRVLVVTGDRDSLQLVTDDVTVLYPRRGVSDLTRFTPA
AVEEKYGLTPQQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIREFGSLTDLVDRVDEVRG
KTGDALRAHLSSVLLNRQLTEMVRDMTLPYTPDQLALAPWDRDRIHRLFDDLEFKVLRDR
LFATLSSVEPEAEEGFEVRGGVLEPGALTGWLAEHAGPGARHGITVLGSCVPYGGDATAV
AIAAADGEGAYVDTTTLTPEDESALTGWLADAAVPKALHEAKAALHALRGRGWTLAGVTS
DTALAAYLVRPGQRSFNLDDLSLRYLKRELRVEESGEQQLSLLDDADAADAKAAESAILR
ARAVVDLAAALDTELEGIESTALLTDMELPLLGVLADLETTGIAVEAERLEDLQSGFVAD
VAAAASAAYDVIGKQINLGSPKQLQVVLFDELDMPKTKKTKTGYTTDAEALQNLFEQTGH
PFLEHLLAHREAMKMKTTVDGLIKSIADDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRT
EAGRHIRDAFVVGPGYDLLLTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVGSRAF
GVPIEEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTDEAREQMEAYFNRFGGVRDYL
HAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAADIIKVAMID
VQTALRGAGLRSRMLLQVHDELVLEVTADEREQVQQLVRDKMASVIDLSVPLDVSVGFGR
SWDAAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgcgcatcgacctcctccgcccccgccgcctccggtggcgaccgaccgacccta
ttgctgctcgacgggcattccctggcgttccgcgcgtactacgcactgccggcggagaac
ttcaagacccacagcgggcagaccaccaatgcggtgtacgggttcacctccatgctcatc
aacctgctgcgcgacgagcaacccacccacgtcgccgccgcgttcgacgtcaaccgcgac
acgttccgggcgacggcgtatcccgagtacaaggccaaccgcagctccgcgcccgacgag
ttccgcggtcagatcgacatcaccaaggacgtgctcgaggccctgggtatcccagtgatg
gccgaggccggtttcgaggccgacgacatcatcgcgaccctggccacgcaggccacggcc
caggggtatcgggtgctcgtcgtcaccggcgaccgggactccctgcaactggtcaccgac
gacgtcaccgtcctgtatccccggcgcggagtgtcggacctgacccggttcacgccggca
gcggtggaggagaagtacgggctgaccccgcagcagtaccccgacttcgcggcgctgcgc
ggggatccgagcgacaacctgccgtcgatcccgggcgtgggggagaagaccgccgccaaa
tggatccgcgagttcgggagcctcaccgacctcgtcgaccgcgtcgacgaggttcgcgga
aagaccggcgacgccctgcgggcgcacctgtcgagcgtgctgctcaaccgtcagctcacc
gagatggtgcgggacatgaccctgccctacacccccgaccagctggcgctggcaccctgg
gaccgcgaccgcatccaccggctgttcgacgacctcgagttcaaggtcctgcgcgaccgg
ctgttcgcgacgctcagctcggtcgaacccgaggccgaggagggcttcgaggtgcgcggc
ggcgtgctcgagccgggtgcgctcaccgggtggctggccgagcatgccgggccgggtgcg
cggcacgggatcaccgtgctcgggtcctgcgttccgtacggcggtgacgccacggccgtg
gcgatcgccgcggccgacggcgagggggcgtacgtggacaccacgaccctcacgcccgag
gacgagtcggcgctgaccggctggctggccgacgcggcggtgcccaaggcgctgcacgag
gcgaaggccgccctgcacgcactgcgcggccgcggctggacgttggccggggtcaccagc
gacaccgccctcgcggcctacctggtgcgtcccggtcagcgcagcttcaatctcgacgac
ctgtccctgcgctacctcaagcgggaactgcgggtcgaggagtcgggggagcagcagctc
tcgctgctcgacgacgccgacgccgcggacgcgaaggccgccgagtcggcgattctgcgg
gcccgggcggtggtggaccttgccgcggccctggacaccgagctcgaagggatcgaatcc
accgccctgctgaccgacatggaactgcccctgctgggggtgctcgctgacctcgagacg
accggcatcgcggtcgaggccgaacggctggaggacctgcagtccggcttcgtcgcggac
gtcgccgccgccgcgtcggccgcctacgacgtgatcggcaaacagatcaacctcggctca
ccgaagcagctgcaggtggtgctgttcgacgagctggacatgccgaagacgaagaagacc
aagaccggctacaccaccgacgccgaggcgctgcagaacctgttcgagcagaccgggcac
ccgttcctcgaacatctgctcgcccaccgggaagcgatgaagatgaagaccacggtcgac
ggtctgatcaaatctatcgccgacgacggccgcatccacaccaccttcaaccagaccgtg
gcggccacaggccggctctcctcgaccgagccgaatctgcagaacatcccggtgcgcacg
gaggcgggccggcacatccgcgacgcgttcgtcgtgggccccggctatgacctgctgctc
accgcggactacagccagatcgagatgcggatcatggcccacctctccggggacgagggg
ctgatcgaggccttcaacaccggcgaggacctgcacagtttcgtcggctcccgggccttc
ggggtgccgatcgaggaggtcacccccgaactgcggcggcgggtcaaggcgatgtcgtac
ggcctggcctacgggctcagcgcgtacgggctggcgcagcagctgaagatctccaccgac
gaggcccgcgagcagatggaggcgtacttcaaccgcttcggcggcgtgcgcgactacctg
cacgccgtcgtcgaacaggcccgcaaggacggctacacctcgaccctctacgggcgccgc
cgctacctgccggacctgaacagcgacaaccgtcagcgccgggaggtcgccgagcgggcc
gcgctcaatgccccgatccagggcaccgccgccgacatcatcaaggtcgcgatgatcgac
gtgcagacggcgctgcgcggggccgggttgcgctcgcgcatgctcctgcaggtgcacgac
gaactggtgctcgaggtgaccgccgacgagcgcgaacaggtgcagcagctggtgcgggac
aagatggcctcggtcatcgacctgtcggttccgctggacgtctcggtcggcttcgggcgc
agctgggacgccgccgcgcactga
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