Rhodococcus sp. M8: ISO16_05925
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Entry
ISO16_05925 CDS
T11421
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03030
DNA replication
rhmm03430
Mismatch repair
rhmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ISO16_05925
03430 Mismatch repair
ISO16_05925
03440 Homologous recombination
ISO16_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhmm03032
]
ISO16_05925
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_05925
Enzymes [BR:
rhmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ISO16_05925
DNA replication proteins [BR:
rhmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ISO16_05925
DNA repair and recombination proteins [BR:
rhmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ISO16_05925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Csp
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QPG46570
LinkDB
All DBs
Position
complement(1327452..1328420)
Genome browser
AA seq
322 aa
AA seq
DB search
MSNPQLHLVLGDEDLLVERAVARIVGDVRARTGAGSELPVSRLRAGDAGAAELAELLSPS
LFAEDRVVVLESAAEAGKDAVALILDAATEPPEGVSLVVLHSGGGRAKAMVGALQKCGAE
THECARITKAAERVDFVRAEFRAAGVRVAPEVVQAVIDAVGSDLRELAAACSQLVADTGG
KIDAAAVQRYYSGKAEVTGFEVAEKAVAGDEPGALESLRWATHRGVAHVLLADALADAVH
TIARVGSAGRGDPFKMASELGMPPWKVKKAQAQARAWDPGSIGAALQVVADLNADVKGAA
ADADYAVERAVRRVAGLAGRTH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacccgcagctgcatctcgtgctcggtgacgaagacctcctcgtcgaacgcgcc
gtcgcgcggatcgtcggtgacgtccgggcgcggacgggtgcggggtccgagctgcccgtc
tcgcggctgcgcgccggggacgccggcgcggccgaactcgccgagctgctcagcccgtcg
ctgttcgccgaggaccgggtggtcgtcctcgaatccgccgcggaggccggcaaggacgcc
gtcgcgctgatcctcgatgcggcgaccgaaccgcccgagggggtctccctggtcgtcctg
cacagtggcggcggccgcgcgaaggccatggtgggcgccctgcagaagtgcggcgccgag
acccacgagtgcgccaggatcaccaaggcggccgagcgggtggacttcgtgcgtgcggag
tttcgcgcggcgggtgtgcgggtcgcgccggaggtcgtacaggcggtcatcgacgccgtg
ggctccgacctgcgggagctggcagcggcgtgcagccagctggtcgccgacacgggcggc
aagatcgacgccgcagccgtgcagcgctactactccggcaaggccgaggtcaccgggttc
gaggtggccgagaaggccgtggcgggcgacgagccgggggcgctggaatcgttgcggtgg
gcgacgcatcggggcgtcgcgcacgtcctgctcgccgacgccctcgcggatgctgtccac
acgatcgcgcgggtcggctcggccgggcgcggggacccgttcaagatggcatccgagctc
gggatgcctccgtggaaggtgaagaaggctcaggcccaggcacgcgcgtgggacccggga
tcgatcggggcggcgctgcaggtcgtggccgacctcaatgccgacgtcaagggcgcggcc
gcggacgccgactacgcggtggagcgcgccgtgcgccgcgtcgcggggctggccggccgg
acccactag
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