Rhodococcus sp. M8: ISO16_17905
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Entry
ISO16_17905 CDS
T11421
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm00061
Fatty acid biosynthesis
rhmm00071
Fatty acid degradation
rhmm01100
Metabolic pathways
rhmm01212
Fatty acid metabolism
rhmm02024
Quorum sensing
rhmm04146
Peroxisome
Module
rhmm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ISO16_17905
00071 Fatty acid degradation
ISO16_17905
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ISO16_17905
09145 Cellular community - prokaryotes
02024 Quorum sensing
ISO16_17905
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhmm01004
]
ISO16_17905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhmm04147
]
ISO16_17905
Enzymes [BR:
rhmm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ISO16_17905
Lipid biosynthesis proteins [BR:
rhmm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ISO16_17905
Exosome [BR:
rhmm04147
]
Exosomal proteins
Exosomal proteins of breast milk
ISO16_17905
Exosomal proteins of breast cancer cells
ISO16_17905
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QPG43826
LinkDB
All DBs
Position
complement(3958281..3960119)
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AA seq
612 aa
AA seq
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MTALRISDEPVDHSKIEKRAPSVARLFLDRVAASPGTEAFRFPKDDGWESVTWQQVGDRV
RLLTAGLIALGVEPEDRIALASSTRYEWVIVDLAVMCAGAATTTVYPTTKAPDVGFIVSN
SGSRVVVAEDRTQVDKLVEQRAQLPHVQQVVVIDGPGDGDWVITLADLEERGRQLIAESP
NVVEDRVREIRPEHLATLIYTSGTTGKPKGVRLPHSAWTYTAAAVDALGILGPDDLQYLW
LPLSHVFGKVLLSLPLQVGMPTAIDGRVEKIVENLAVVRPTFMGAAPRVFEKAHARIEAM
MAEEGGIKKKIFDWAVGVGTRVSKAKQEGRNPSLLDRLQYKVADKLVFSKIRERFGGRLR
FFVSGSAPLDRDVAQWFDAVGIIVLEGYGLSETSAATFLNRPLAYRFGTVGWPFPETEVK
IAEDGEILIKGPGVMSGYHDRPDADAEAFEDDGWFHTGDIGEVDSDGFLRITDRKKDMFK
TSQGKYVAPSAIAATFKGLCPYASEIIVHGEGRPYCVALVGLDPEAIHEWAQKNGMGDKS
FAEIARDEKTRELIAGYIDQLNEQLNRWEEVKKFTIIDRELSVEAGDLTPSMKLRRKIVI
DNFSDRLTGLYG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgctgcgaatctccgacgaacccgtcgaccactcgaagatcgagaagcgggca
ccgtcggtggctcggctcttcctcgatcgtgtcgcggccagccccggcacggaggcgttc
cggttcccgaaggacgacggctgggagagcgtgacgtggcagcaggtcggtgaccgtgtc
cgcctgctcacggccgggctgatcgcgctcggcgtcgagcccgaggaccgtatcgcgctg
gcgtcgtcgacccggtacgagtgggtgatcgtcgacctcgcggtgatgtgcgcgggcgcc
gcgaccacgacggtctaccccaccaccaaggctcccgacgtggggttcatcgtgtccaac
tcgggcagccgcgtggtcgtcgccgaggacaggacgcaggtcgacaagctcgtcgagcag
cgcgcacagctgccgcacgtgcagcaggtggtggtgatcgacggccccggggacggggac
tgggtgatcaccctggccgacctcgaggagcggggcaggcagctgatcgcggagtcgccg
aacgtcgtcgaggatcgggtccgggagatccggccggagcacctcgccactctcatctac
acgtcgggcaccaccggcaagcccaagggcgttcggctgccgcactcggcgtggacgtac
accgccgccgccgtcgatgccctcggcattctcggcccggacgatctgcagtacctgtgg
ttgcccctgtcgcacgtgttcggcaaggtgctgctgagcctgcccctgcaggtgggcatg
cccaccgccatcgacggccgggtcgagaagatcgtcgagaacctcgccgtcgtgcggccg
accttcatgggcgcggccccacgcgtcttcgagaaggctcacgcgcgcatcgaggcgatg
atggcggaggagggcggcatcaagaagaagatcttcgactgggccgtcggggtcggaacg
cgggtctcgaaggccaagcaggagggccgcaacccgtcgctgctggaccggttgcagtac
aaggtcgccgacaagctcgtcttctccaagatccgggagcggttcggcggccggctgagg
ttcttcgtctccgggtccgcgccgctggaccgcgacgtcgcacagtggttcgatgccgtc
ggcatcatcgtcctcgaggggtacgggctgtcggagacctccgccgcgacgttcctcaac
cggccgctcgcctaccgcttcggcacggtcggctggcccttcccggagaccgaggtcaag
atcgccgaggacggggagatcctcatcaagggtcccggtgtgatgagcggttaccacgat
cgtcccgacgcggacgccgaggcgttcgaggacgacggctggttccacaccggcgacatc
ggcgaggtggactccgacgggttcctgcggatcaccgaccgcaagaaggacatgttcaag
acctcgcagggcaagtacgtcgcgccgtccgccatcgccgcgaccttcaagggcctgtgc
ccgtacgcgagcgagatcatcgtccacggcgagggccggccgtactgcgtggcgctggtg
ggcctcgatccggaggcgatccacgagtgggcccagaagaacggcatgggcgacaagtcg
ttcgcggagatcgcccgggacgagaagacccgtgagctgatcgccgggtacatcgaccag
ctcaacgagcagctcaaccgatgggaggaggtcaagaagttcaccatcatcgaccgcgag
ctgtcggtcgaggccggggacctcacgccgagcatgaaactgcgccgcaagatcgtcatc
gacaacttctccgaccggctcaccgggctgtacggatag
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