Rhodococcus sp. M8: ISO16_20485
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Entry
ISO16_20485 CDS
T11421
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm02020
Two-component system
rhmm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ISO16_20485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ISO16_20485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhmm03000
]
ISO16_20485
Transcription factors [BR:
rhmm03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
ISO16_20485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
GntR
Sigma70_r4
Sigma70_r4_2
MarR_2
HTH_24
HTH_23
HTH_29
HTH_3
HTH_ParB
wHTH-PRTase_assc
HTH_Cmi2_C
HTH_IclR
DUF977
DUF134
HTH_28
CNBH_CNNM2_C
Motif
Other DBs
NCBI-ProteinID:
QPG44254
LinkDB
All DBs
Position
complement(4520732..4521406)
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AA seq
224 aa
AA seq
DB search
MDDVLARAGIFQGVEPSAVAALVKELQPVDFPRGHVIFNEGEPGDRLYIIVSGKVKLGRR
SPDGRENLLTIMGPSDMFGELSIFDPGPRTSTATTVTEVRAVSMDRDALKAWIDQRPEIA
EQLLRVLARRLRRTNNNLADLIFTDVPGRVAKALLQLAQRFGTQEAGALRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWLRLEGKSVLISDSERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgtcctggccagagcaggcatcttccaaggagtcgaaccctcggcggttgcg
gcgctggtcaaagagcttcagccggtcgatttcccccgcggacatgtcatcttcaacgag
ggtgagccgggcgaccgcctgtacatcatcgtctccggcaaggtgaagctcggccgccgc
tcgccggacggccgcgagaacctgctgaccatcatgggcccgtccgacatgttcggtgag
ctgtcgatcttcgacccgggcccgcgtacctccaccgccacgaccgtgaccgaggtccgc
gccgtgagcatggaccgcgacgccctcaaggcctggatcgaccagcgcccggagatcgcg
gagcagctgttgcgcgtgctcgcgcgccgtctgcgccgcaccaacaacaacctggccgac
ctgatcttcaccgacgtgcccggtcgcgtcgcgaaggctctgctgcagctcgcgcagcgg
ttcggcacccaggaggcgggcgcgctgcgcgtcacgcacgacctgacccaggaggagatc
gcacagctcgtcggcgcctcccgcgaaaccgtgaacaaggcgctcgccgacttcgcccac
cgcggctggctgcggctcgagggcaagagcgtgctcatctccgactcggagcgcctcgcc
cgccgcgcgcggtaa
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