Rhodococcus sp. M8: ISO16_24250
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Entry
ISO16_24250 CDS
T11421
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhmm Rhodococcus sp. M8
Pathway
rhmm03420
Nucleotide excision repair
rhmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ISO16_24250 (pcrA)
03430 Mismatch repair
ISO16_24250 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhmm03400
]
ISO16_24250 (pcrA)
Enzymes [BR:
rhmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ISO16_24250 (pcrA)
DNA repair and recombination proteins [BR:
rhmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ISO16_24250 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ISO16_24250 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPG48365
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All DBs
Position
5323073..5325457
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AA seq
794 aa
AA seq
DB search
MTPDALLEGLNPQQREAVTHTGSPLLIVAGAGSGKTAVLTRRIAYLLGERGVAPGQILAI
TFTNKAAAEMRERVAHLVGPRANSMWVSTFHSSCVRILRAQSALLSGMNSNFTIYDADDS
RRLLTMIAKDLDLDVKRYSARLLATHISNLKNELIGPEEAAADADREAAELPRIVARVYA
HYQQRLRAANAFDFDDLIGETVALLQAHPQVAEYYRRRFRHVLVDEYQDTNHAQYVLVRT
LVGGADDTVTDDAVAPGELCVVGDADQSIYAFRGATIRNIEEFERDYPDARTILLEQNYR
STQNILSAANAVIARNTGRREKRLWTDSGAGEPITGYVADNEHDEAQFVAAEIDRLVDAG
EARFADVAVFYRTNNSSRALEDVFIRHGVPYRVVGGVRFYERKEVRDLVAYLRVLANPDD
TVSLRRILNTPRRGIGDRAEACVAVHAERTAVGFGRALRDAAEGTVPLLNTRSQKAIAAF
VDLMDELRGMLTETDADGNDLVDIGDVVEAVLDRTGYRAELEASDDPQDGTRLDNLNELV
SVAREFSSDARNAAGLEEEREGAEGEPEPGSLAAFLERVSLVADADQIPEEGDGVVTLMT
LHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGLTRARQRLYLSRAVLR
SAWGQPVTNPESRFLQEIPQELVEWRREDPGVAGGHAIGAGRGRGGYGGVGSGFGGGASR
FGDDRQSTPSFGAARSRNNHLVLAVGDRVSHDKYGLGTVLETRGSGPTATVVIDFGSAGK
VRLMLVGGVPMVKL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgacgcgctgctcgagggactcaatccccagcaacgggaggccgtgacccac
acggggtctccgctgctcatcgtcgcgggggccggctccggcaagacggcggtgctgacc
cggcgcatcgcgtacctgctgggtgagcgtggggtggcgccgggccagatcctggcgatc
acgttcaccaacaaggcggccgccgagatgcgcgagcgcgtcgcccacctcgtcggtccg
cgcgcgaacagcatgtgggtgtcgacgttccattcgagctgcgtgcggatcctgcgggcg
cagtcggcgctgctgtcggggatgaactcgaacttcaccatctacgacgcggacgactcc
cggcggctgctcaccatgatcgccaaggatctcgacctcgacgtcaagcggtattccgcg
cggctgctggcgacgcacatctccaatctcaagaacgagctgatcggccccgaggaggcc
gcggccgacgcggaccgcgaggcggcggaactgccgcggatcgtcgcgcgggtctacgcg
cactaccagcagcggctgcgtgcggccaacgccttcgacttcgacgacctgatcggcgag
acggtggcactgttgcaggcgcatccgcaggtggcggagtactaccgccgacggttccgc
cacgttctcgtcgacgaataccaggacaccaaccacgcgcagtacgtgctcgtgcgcacg
ctcgtgggcggtgcggacgacaccgtgacggacgatgcggtcgcgccgggggagctgtgt
gtcgtcggcgatgccgaccagtccatctacgcgttccgcggcgcgacgatccgcaacatc
gaggagttcgaacgcgactatcccgacgctcgcacgatcctgctcgagcagaactaccgt
tccacgcagaacatcctctcggcggccaacgcggtgatcgcgcgcaacaccggacgacgg
gagaagcggttgtggacggactccggcgcgggggaaccgatcaccgggtacgtcgccgac
aacgagcacgacgaggcgcagttcgtggccgcggagatcgaccggctcgtcgacgccggt
gaggccaggttcgccgacgtcgcggtgttctaccgcaccaacaactcctcccgtgccctc
gaggacgtgttcatccggcacggcgtgccctaccgggtggtcggcggcgtgcgcttctac
gagcgcaaggaggtccgcgacctcgtcgcgtacctgcgggtgctcgccaacccggacgac
acggtcagcctgcgccgtattctcaacaccccccgtcgcggcatcggcgaccgcgcggag
gcctgcgtggcggtgcacgccgaacgcacggcggtcgggttcggccgggccctgcgcgac
gcggccgagggcaccgtgcccctgctgaacacccgctcgcagaaggccatcgccgcgttc
gtcgacctcatggacgagctgcgggggatgctcaccgagaccgacgccgacggcaacgac
ctcgtcgacatcggcgacgtcgtcgaggcggtcctcgaccgcaccggttaccgcgccgag
ctcgaggccagcgacgacccgcaggacggcacgcggctcgacaatctcaacgagttggtc
agcgtggcaagggaattcagttcggatgcccgcaatgccgcgggtctcgaggaggaacgg
gagggcgcggagggggagcccgagcccggctcgctcgccgcgttcctcgaacgggtgtcg
ctggtggccgacgccgaccagatccccgaggagggcgacggggtcgtcaccctgatgacg
ctgcacaccgccaagggtctcgagttcccggtggtgttcgtgaccgggtgggaggacggg
cagttcccgcacatgcgagcgctcggcgacccggccgagctgtcggaggaacggcgcctg
gcctatgtcgggctcacccgcgcgcggcagcgcctctacctgagccgggcggtgctgcgc
tcggcctgggggcagccggtgaccaatccggaatcgcgcttcctgcaagagattccgcag
gaactcgtggagtggcgccgggaggatccgggggtggccggtggtcacgccatcggagcc
ggccggggccggggcggctacggcggagtcggctccggcttcgggggcggagcgtcccgg
ttcggcgacgaccggcagtcgacaccgagtttcggggccgcgcgctcgcgcaacaaccat
ctcgtgctcgccgtcggcgaccgggtcagccacgacaagtacggcctcggcacggtcctc
gagacccgcggctccgggccgacggcgacggtggtcatcgacttcggcagcgccgggaag
gtgcggctgatgctcgtcggcggcgtgccgatggtcaagctttga
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